Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_B09
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0273 + 32787021-32787434,32788096-32788221,32788305-327883...    30   2.3  
01_03_0050 + 11959421-11959736,11959892-11959960,11960641-119609...    29   4.0  
04_04_0412 + 25023758-25023826,25023927-25023991,25024082-250241...    28   9.2  

>03_06_0273 +
           32787021-32787434,32788096-32788221,32788305-32788378,
           32788468-32788537,32788622-32788677,32788762-32788833,
           32788945-32789039,32789196-32789262,32789359-32789488,
           32789578-32789793,32789887-32790017,32790719-32790893,
           32790977-32791067,32792151-32792308,32792763-32792951,
           32793066-32793125
          Length = 707

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 14  SIRNAHRXFKKKTHVNXARYGFYLHXHLERNDNKSYLLKCV 136
           S+ NA R  K++ H N A     LH H+E+ +     + CV
Sbjct: 473 SVYNARRPMKQRYHYNVA--DSRLHQHIEKGNEDGLYISCV 511


>01_03_0050 +
           11959421-11959736,11959892-11959960,11960641-11960979,
           11961090-11961152,11962472-11962962,11963773-11964441
          Length = 648

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = +1

Query: 283 ISLIKHTHVKISIKHLI*LKYTY*YENICYFYSSXNLRLRIYFENIIPPNNAI 441
           +SL+ H H+K+S K L   K ++ Y+   Y  S     L I  +    P +A+
Sbjct: 323 VSLVDHAHIKVSEKRLRTQKRSFSYKKDRYSKSKKKKNLNILSKEEDKPAHAV 375


>04_04_0412 +
           25023758-25023826,25023927-25023991,25024082-25024145,
           25024806-25024940,25025029-25025160,25025470-25025553,
           25025638-25025736,25025992-25026083,25026280-25026352,
           25026476-25026628,25026721-25026840,25026926-25026979,
           25027188-25027271,25027431-25027505,25027585-25027728,
           25028016-25028123,25028340-25028459,25028909-25029102,
           25029193-25029319
          Length = 663

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 487 KTKVLCIQNLKFINILLHY 431
           ++ +LC   LKF+N LLHY
Sbjct: 495 RSSILCRSMLKFVNSLLHY 513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,407
Number of Sequences: 37544
Number of extensions: 222588
Number of successful extensions: 292
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)