Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B04
(393 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0235 - 1807448-1807709,1807818-1807921,1809133-1809228,180... 36 0.012
04_04_0808 - 28196563-28196735,28197369-28197440,28197540-281976... 30 0.76
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 29 1.3
06_03_0374 + 20026179-20026661,20027170-20027280,20027372-200274... 28 3.1
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 28 3.1
09_04_0246 - 16024454-16024529,16024635-16024720,16024805-160248... 27 4.1
07_03_0650 + 20274332-20274760,20274920-20274985,20275135-202752... 27 5.4
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 27 5.4
09_06_0105 + 20896203-20896424,20896502-20896714,20896798-208969... 27 7.1
02_05_0965 + 33136373-33136512,33136595-33136688,33136845-331368... 27 7.1
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 26 9.4
06_03_1380 + 29747187-29747267,29747349-29747481,29747758-297477... 26 9.4
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 26 9.4
02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 26 9.4
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 26 9.4
01_03_0269 + 14442886-14442978,14443306-14443377,14443551-144440... 26 9.4
>11_01_0235 -
1807448-1807709,1807818-1807921,1809133-1809228,
1809323-1809382
Length = 173
Score = 35.9 bits (79), Expect = 0.012
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSL---ASSRIIPIPKTAEE 205
EAPL V+ +V+++DP + K + ++Y E+G KVR + AS +IP P+ +E
Sbjct: 71 EAPLHVS-NVQVLDPVTGKPCKIGYKYLEDGTKVRFARGMNASGAVIPRPEILKE 124
>04_04_0808 -
28196563-28196735,28197369-28197440,28197540-28197666,
28198362-28198430,28198517-28198583,28198751-28198872,
28199302-28199412,28199596-28199661,28200156-28200213,
28200307-28200343,28200420-28200513,28200967-28201032,
28201139-28201203,28201352-28201496,28201925-28202074,
28202266-28202335,28202752-28202828,28202919-28202987,
28203798-28203881,28204018-28204061,28204172-28204273,
28204420-28204618,28204672-28204727,28204886-28204958,
28205685-28205771,28205863-28205976,28206985-28207092,
28207183-28207278,28207722-28207787,28208130-28208222,
28208429-28208512,28208961-28209078,28209191-28209267,
28209459-28209641,28210542-28210636,28210903-28211053,
28212218-28212325,28212513-28212612,28212788-28212840,
28214022-28214102
Length = 1269
Score = 29.9 bits (64), Expect = 0.76
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = -1
Query: 267 DKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVT 133
++ V+L I+P+ T+ + S+ D + +++TADA+T
Sbjct: 463 ERAYVNLVKEEILPMVLAHNLTMSFSSESSIQDELNRESTADAIT 507
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 321 DPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYK-SKELYIDNIEKDT 151
DP S K D + TEE DK+ + S + + E I + KE+ + N+ K +
Sbjct: 2602 DPNSAKLEDEKQTVTEENDKMVIVKVESSVKNLSLEVAENITLEDEKEMEVGNLGKSS 2659
>06_03_0374 +
20026179-20026661,20027170-20027280,20027372-20027416,
20029610-20029682,20029762-20029874,20030009-20030068,
20031518-20031565,20031658-20031726,20032928-20033092,
20033630-20033680,20034774-20034803
Length = 415
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -1
Query: 261 VRVSLASSRIIPI-PKTAEETIDYK---SKELYIDNIEKDTTADAV 136
VRV + + I+P+ PK T D K S+ +Y NI+K+ DAV
Sbjct: 256 VRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAV 301
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 309 LKATDVEWRYTEEGDKVRVSLASSRI 232
L+ DV W+YT +K + LAS+ +
Sbjct: 2093 LEPVDVSWKYTSVSEKTNIVLASTDV 2118
>09_04_0246 -
16024454-16024529,16024635-16024720,16024805-16024894,
16025349-16025435,16026112-16026229,16026852-16026982,
16027619-16027909,16028000-16028124,16028209-16028334,
16028452-16028487,16028599-16028902
Length = 489
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 269 EIRYECHWPAVESYPFLKQPKKQLITRVKSCTLIILKRTP 150
+IR E H + + P+LK+ ++Q + R K T I+ + P
Sbjct: 70 KIREELHQKYLRAEPWLKEQERQRLERNKRFTTEIINQPP 109
>07_03_0650 +
20274332-20274760,20274920-20274985,20275135-20275205,
20275525-20275537
Length = 192
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 141 AVTKITFAPKLRTFEMDIMEEMGIKEDR 58
A+T++ +PK R D+ +E+GI +DR
Sbjct: 146 ALTQLELSPKRRCNTRDLTKEVGIGDDR 173
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 27.1 bits (57), Expect = 5.4
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKE 181
+ P L T + +D E + DV+ E D R AS + P +A + +E
Sbjct: 493 DLPALDPTIEQALDEEDI-GEDVDQAVAEMSDTERTPSASPKQTPPTPSAPFIL----QE 547
Query: 180 LYIDNIEKDTTADAVTKIT 124
Y+D E+DT++ A+ ++
Sbjct: 548 DYLDEAEEDTSSKALAPLS 566
>09_06_0105 +
20896203-20896424,20896502-20896714,20896798-20896953,
20897034-20897990
Length = 515
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKT-AEETID 196
+ P + V+LVD + KA + W GD+V +L I+ + AEE I+
Sbjct: 64 DTPYVRAKRVQLVDKDPEKAIALFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIE 119
>02_05_0965 +
33136373-33136512,33136595-33136688,33136845-33136889,
33137007-33137174,33137247-33137331,33137531-33137637,
33137918-33137998,33138232-33138284,33138361-33138460,
33138911-33139054,33139268-33139364,33139528-33139611,
33139904-33140123,33140204-33140297,33140406-33140975,
33141348-33141449,33141564-33141656,33141834-33141836
Length = 759
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -1
Query: 180 LYIDNIEKDTT-----ADAVTKITFAPKLRTFEMDIMEEMGIKEDRVPA 49
+YI I KD + A T++ + KLRT E++ ++ + + + ++PA
Sbjct: 376 VYIYTISKDVSGSCGSATTTTQLPYQQKLRTLELNSLQFLRLLQAQLPA 424
>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 26.2 bits (55), Expect = 9.4
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 124 SYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGYDSTAGQ*HSYLISFFSVSPFYISS 303
SY C V++NI+ L+T++I GYD A + + FF V+ F +
Sbjct: 1243 SYAFAQACVEVIYNILQGILYTIIIYAMI-----GYDWKADK--FFYFMFFIVASFNYFT 1295
Query: 304 LQGL 315
L G+
Sbjct: 1296 LFGM 1299
>06_03_1380 +
29747187-29747267,29747349-29747481,29747758-29747770,
29748027-29748118,29749011-29749831,29750375-29750677
Length = 480
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 40 VTFGGNPILFYTHFF 84
+T GNP +FY HFF
Sbjct: 372 LTHPGNPCIFYDHFF 386
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 26.2 bits (55), Expect = 9.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -1
Query: 333 VKLVDPESL-KATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEK 157
+K D ES KA G+ + V +A + T D LYI N+ +
Sbjct: 463 IKFTDSESATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPR 522
Query: 156 DTTADAVTKITFAP 115
TAD + + FAP
Sbjct: 523 SMTADKMVNL-FAP 535
>02_05_0854 -
32267047-32267298,32267383-32268194,32268289-32268421,
32268530-32268619
Length = 428
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 40 VTFGGNPILFYTHFF 84
+T GNP +FY HFF
Sbjct: 337 LTHPGNPCIFYDHFF 351
>02_05_0853 +
32261705-32261794,32261895-32262027,32262117-32262928,
32263020-32263271
Length = 428
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 40 VTFGGNPILFYTHFF 84
+T GNP +FY HFF
Sbjct: 337 LTHPGNPCIFYDHFF 351
>01_03_0269 +
14442886-14442978,14443306-14443377,14443551-14444045,
14444134-14444253
Length = 259
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 40 VTFGGNPILFYTHFF 84
+T GNP +FY HFF
Sbjct: 212 LTHPGNPCIFYDHFF 226
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,487,634
Number of Sequences: 37544
Number of extensions: 170825
Number of successful extensions: 510
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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