Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B04
(393 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p pro... 158 2e-39
AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA ... 158 2e-39
X61209-1|CAA43523.1| 1447|Drosophila melanogaster DNA topoisomer... 28 3.8
BT010240-1|AAQ23558.1| 1157|Drosophila melanogaster RE49802p pro... 28 3.8
AE014134-3099|AAF53802.2| 1447|Drosophila melanogaster CG10223-P... 28 3.8
AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-P... 28 3.8
BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p pro... 28 5.1
AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p pro... 28 5.1
AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,... 28 5.1
AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,... 28 5.1
AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,... 28 5.1
M38384-1|AAA28901.1| 314|Drosophila melanogaster SEVEN IN ABSTE... 27 8.9
AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p pro... 27 8.9
AY060358-1|AAL25397.1| 314|Drosophila melanogaster HL08111p pro... 27 8.9
AE014296-2814|AAN11744.1| 314|Drosophila melanogaster CG9949-PB... 27 8.9
AE014296-2813|AAF49403.1| 314|Drosophila melanogaster CG9949-PA... 27 8.9
AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA... 27 8.9
AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB... 27 8.9
>AY095024-1|AAM11352.1| 247|Drosophila melanogaster LD05344p
protein.
Length = 247
Score = 158 bits (384), Expect = 2e-39
Identities = 75/112 (66%), Positives = 87/112 (77%)
Frame = -1
Query: 369 IQSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYK 190
I+SEAPL VT D++LVDP L+ TD EWR+TEEG+KVRVSL S RIIPIP+T +T DYK
Sbjct: 137 IKSEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYK 196
Query: 189 SKELYIDNIEKDTTADAVTKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 34
+ YI+ EKDT V +ITF PKL TFEMDIMEEMGIKE+R P KSYWY
Sbjct: 197 TPNAYIER-EKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247
>AE014134-810|AAF52176.1| 247|Drosophila melanogaster CG8849-PA
protein.
Length = 247
Score = 158 bits (384), Expect = 2e-39
Identities = 75/112 (66%), Positives = 87/112 (77%)
Frame = -1
Query: 369 IQSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYK 190
I+SEAPL VT D++LVDP L+ TD EWR+TEEG+KVRVSL S RIIPIP+T +T DYK
Sbjct: 137 IKSEAPLHVTKDIRLVDPSDLQGTDFEWRFTEEGEKVRVSLRSGRIIPIPETNNQTHDYK 196
Query: 189 SKELYIDNIEKDTTADAVTKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 34
+ YI+ EKDT V +ITF PKL TFEMDIMEEMGIKE+R P KSYWY
Sbjct: 197 TPNAYIER-EKDTPGAVVGEITFQPKLSTFEMDIMEEMGIKEERTPVKSYWY 247
>X61209-1|CAA43523.1| 1447|Drosophila melanogaster DNA topoisomerase
type II protein.
Length = 1447
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 159 KDTTADAVTKITFAPKLRTFEMDIMEE 79
KD T+ITF+P L F+MD ++E
Sbjct: 188 KDFNGTDYTRITFSPDLAKFKMDRLDE 214
>BT010240-1|AAQ23558.1| 1157|Drosophila melanogaster RE49802p
protein.
Length = 1157
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 159 KDTTADAVTKITFAPKLRTFEMDIMEE 79
KD T+ITF+P L F+MD ++E
Sbjct: 73 KDFNGTDYTRITFSPDLAKFKMDRLDE 99
>AE014134-3099|AAF53802.2| 1447|Drosophila melanogaster CG10223-PA
protein.
Length = 1447
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 159 KDTTADAVTKITFAPKLRTFEMDIMEE 79
KD T+ITF+P L F+MD ++E
Sbjct: 188 KDFNGTDYTRITFSPDLAKFKMDRLDE 214
>AE013599-3437|AAF46880.1| 122|Drosophila melanogaster CG13511-PA
protein.
Length = 122
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 240 CWPMTLVPYLLLQCISILHQ*PS 308
CWP +PY + C S+ H P+
Sbjct: 90 CWPFICLPYFINYCKSVQHYCPN 112
>BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p
protein.
Length = 1044
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAE 208
+A ++++TD + ++ + + V RY +GDKVR + + KTAE
Sbjct: 324 QAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAE 374
>AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p
protein.
Length = 1032
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAE 208
+A ++++TD + ++ + + V RY +GDKVR + + KTAE
Sbjct: 312 QAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAE 362
>AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,
isoform B protein.
Length = 1032
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAE 208
+A ++++TD + ++ + + V RY +GDKVR + + KTAE
Sbjct: 312 QAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAE 362
>AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,
isoform A protein.
Length = 1032
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAE 208
+A ++++TD + ++ + + V RY +GDKVR + + KTAE
Sbjct: 312 QAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAE 362
>AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,
isoform C protein.
Length = 1044
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 360 EAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAE 208
+A ++++TD + ++ + + V RY +GDKVR + + KTAE
Sbjct: 324 QAFIIMSTDREALERDGIVLLPVARRYAFDGDKVRAFVLNPGAQGSSKTAE 374
>M38384-1|AAA28901.1| 314|Drosophila melanogaster SEVEN IN
ABSTENTIA protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 145 CSGVLFNIINVQLFTLVINCFFGCFRNGYDSTA 243
C G L NI N+ + + N F C +GY TA
Sbjct: 107 CRGPLANIRNLAMEKVASNVKFPCKHSGYGCTA 139
>AY089293-1|AAL90031.1| 462|Drosophila melanogaster AT08706p
protein.
Length = 462
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +1
Query: 28 VLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 171
+L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 148 LLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 201
>AY060358-1|AAL25397.1| 314|Drosophila melanogaster HL08111p
protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 145 CSGVLFNIINVQLFTLVINCFFGCFRNGYDSTA 243
C G L NI N+ + + N F C +GY TA
Sbjct: 107 CRGPLANIRNLAMEKVASNVKFPCKHSGYGCTA 139
>AE014296-2814|AAN11744.1| 314|Drosophila melanogaster CG9949-PB,
isoform B protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 145 CSGVLFNIINVQLFTLVINCFFGCFRNGYDSTA 243
C G L NI N+ + + N F C +GY TA
Sbjct: 107 CRGPLANIRNLAMEKVASNVKFPCKHSGYGCTA 139
>AE014296-2813|AAF49403.1| 314|Drosophila melanogaster CG9949-PA,
isoform A protein.
Length = 314
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 145 CSGVLFNIINVQLFTLVINCFFGCFRNGYDSTA 243
C G L NI N+ + + N F C +GY TA
Sbjct: 107 CRGPLANIRNLAMEKVASNVKFPCKHSGYGCTA 139
>AE013599-2034|AAF58152.1| 481|Drosophila melanogaster CG8102-PA,
isoform A protein.
Length = 481
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +1
Query: 28 VLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 171
+L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 167 LLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 220
>AE013599-2033|AAM68529.1| 462|Drosophila melanogaster CG8102-PB,
isoform B protein.
Length = 462
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = +1
Query: 28 VLIPVTFG-GNPILFYTHFFHN----VHFKGPEFWRKSYLSNSIC-SGVLFNII 171
+L+ V G G I++ + F+N +HF E + L NS+C +G+ F+++
Sbjct: 148 LLVGVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDVM 201
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,940,732
Number of Sequences: 53049
Number of extensions: 299928
Number of successful extensions: 777
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1107890535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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