Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_B04
(393 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80448-1|AAB37815.1| 278|Caenorhabditis elegans Hypothetical pr... 98 2e-21
Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical pr... 30 0.51
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 2.1
Z92829-14|CAB07342.2| 337|Caenorhabditis elegans Hypothetical p... 27 4.8
Z82280-7|CAB05268.3| 304|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H... 27 6.3
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 27 6.3
Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 26 8.4
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 26 8.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 26 8.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 26 8.4
AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical... 26 8.4
>U80448-1|AAB37815.1| 278|Caenorhabditis elegans Hypothetical
protein F59A3.3 protein.
Length = 278
Score = 97.9 bits (233), Expect = 2e-21
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = -1
Query: 360 EAPLLVTT-DVKLVDPESLKATDVEWRYTEEGDK-VRVSLASSRIIPIPKTAEETIDYKS 187
E PL V+ V LVDP + + W+ GD+ +RVS S IPIP A+ T +Y
Sbjct: 168 EQPLSVSKKQVMLVDPNDEQPCEARWQLNGPGDEYIRVSTRSGYEIPIPSQAKVTYEYLQ 227
Query: 186 KELYIDNIEKDTTADAVTKITFAPKLRTFEMDIMEEMGIKEDRVPAKSYWY 34
E YI+ KDT ADAV + T+ PK+ +FE +IMEEMGIKE+R P ++WY
Sbjct: 228 PENYIEVEGKDTPADAVLERTYMPKVASFEQEIMEEMGIKEERTPKPTFWY 278
>Z82282-2|CAB05274.2| 544|Caenorhabditis elegans Hypothetical
protein T07G12.2 protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.51
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 246 PMTLVPYLLLQCISILHQ*PSRTLGRPISHQWLPIAEL 359
P+T+VP L+L CI + + + + +SH W+ I E+
Sbjct: 150 PITIVPMLMLLCIGTV-----QDIEQKVSHHWISIVEI 182
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 9/49 (18%)
Frame = -1
Query: 198 DYKS--KELYIDNIEKD-------TTADAVTKITFAPKLRTFEMDIMEE 79
DYKS K+ +I N+ +D +T + TKITF+P L F+M +++
Sbjct: 220 DYKSAFKQTWIKNMTRDEEPKIVKSTDEDFTKITFSPDLAKFKMKELDD 268
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical
protein K12D12.1 protein.
Length = 1520
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 9/49 (18%)
Frame = -1
Query: 198 DYKS--KELYIDNIEKD-------TTADAVTKITFAPKLRTFEMDIMEE 79
DYKS K+ +I N+ +D +T + TKITF+P L F+M +++
Sbjct: 220 DYKSAFKQTWIKNMTRDEEPKIVKSTDEDFTKITFSPDLAKFKMKELDD 268
>Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical
protein F28H7.9 protein.
Length = 366
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/59 (27%), Positives = 23/59 (38%)
Frame = +1
Query: 61 ILFYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGYDS 237
+L Y F P F Y +N + LF N+ F + CF CF Y++
Sbjct: 82 VLLYFQFHDAESMNDPSFADLIYTANYTRTICLFVAFNMLPFLVFERCFATCFAGTYEN 140
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = -1
Query: 297 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 118
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 117 PKLRTFEMDIMEEMG 73
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = -1
Query: 297 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 118
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 117 PKLRTFEMDIMEEMG 73
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = -1
Query: 297 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 118
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 117 PKLRTFEMDIMEEMG 73
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = -1
Query: 297 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 118
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 117 PKLRTFEMDIMEEMG 73
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = -1
Query: 297 DVEWRYTEEGDKVRVSLASSRIIPIPKTAEETIDYKSKELYIDNIEKDTTADAVTKITFA 118
D W + E +R+ + + I TAE S++ +I NI T + + T
Sbjct: 1779 DKSWLFDESLSLLRIEKLTGKSAQISCTAENKAGTASRDFFIQNIAAPTFKNEGDQETIF 1838
Query: 117 PKLRTFEMDIMEEMG 73
+ T +D +G
Sbjct: 1839 RESETITLDCPVSLG 1853
>Z92829-14|CAB07342.2| 337|Caenorhabditis elegans Hypothetical
protein F10A3.8 protein.
Length = 337
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 43 TFGGNPILFYTHFFHNVHFKGPEFWRKSYLSNSICSGVLFNII 171
TFG L ++F +FW K Y+ S S +FN++
Sbjct: 39 TFGSYKYLMICFSICGIYFSCCDFWCKPYVHMSKNSFAIFNVL 81
>Z82280-7|CAB05268.3| 304|Caenorhabditis elegans Hypothetical
protein R05A10.7 protein.
Length = 304
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 253 HSYLISFFSVSPFYISSL-QGLWVDQFHISGY 345
H+Y++ +S +YI+SL L QF+ SGY
Sbjct: 89 HTYILYGLGLSEYYINSLPDNLEFRQFNTSGY 120
>Z95622-1|CAB09132.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 NPILFYTHFFHNVHFKGPEFW-RKSYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGY 231
+P LF+ + + + F K+++SN I + LF + + + +CF F+N Y
Sbjct: 36 HPDLFFLYLLPPIVLEAGYFMPNKAFISN-ITTISLFAVAGTVMNIFLTSCFIFAFQNFY 94
Query: 232 D 234
D
Sbjct: 95 D 95
>Z68131-3|CAA92219.2| 480|Caenorhabditis elegans Hypothetical
protein B0395.1 protein.
Length = 480
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 NPILFYTHFFHNVHFKGPEFW-RKSYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGY 231
+P LF+ + + + F K+++SN I + LF + + + +CF F+N Y
Sbjct: 36 HPDLFFLYLLPPIVLEAGYFMPNKAFISN-ITTISLFAVAGTVMNIFLTSCFIFAFQNFY 94
Query: 232 D 234
D
Sbjct: 95 D 95
>AF497823-1|AAM18101.1| 479|Caenorhabditis elegans putative Na-H
exchanger isoform 1 protein.
Length = 479
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 55 NPILFYTHFFHNVHFKGPEFW-RKSYLSNSICSGVLFNIINVQLFTLVINCFFGCFRNGY 231
+P LF+ + + + F K+++SN I + LF + + + +CF F+N Y
Sbjct: 35 HPDLFFLYLLPPIVLEAGYFMPNKAFISN-ITTISLFAVAGTVMNIFLTSCFIFAFQNFY 93
Query: 232 D 234
D
Sbjct: 94 D 94
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 222 PKTAEETIDYKSKELYIDNIEKDTTADAVTKITFAPKLR 106
P+ T +++E+ +D+ ++ DA+T TF PK +
Sbjct: 1136 PQKLRFTTTVQTREISLDDEVVESDDDAITSTTFEPKYK 1174
>Z82282-4|CAB05276.1| 485|Caenorhabditis elegans Hypothetical
protein T07G12.4 protein.
Length = 485
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 246 PMTLVPYLLLQCISILHQ*PSRTLGRPISHQWLPIAEL 359
P+T+VP L+L CI ++ + +S W+ I E+
Sbjct: 88 PITIVPMLILLCIGVIPD-----IEHKVSLHWISIIEI 120
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 234 FDCWPMTLVPYLLLQCISILHQ*PS 308
F CW +P+ L C I+H P+
Sbjct: 106 FGCWCCCFLPFCLRSCKDIIHTCPN 130
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5139 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5192
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5480 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5533
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5139 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5192
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5500 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5553
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5139 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5192
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = -1
Query: 366 QSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKVRVSLASSRIIPIPKTAEETID 196
Q + P+ T V+P K VE + T E + +++P+P+T+ T++
Sbjct: 5500 QKDVPV-PETSAPTVEPTVEKHAPVESKETSEVQPAEI--VEQKVVPVPETSAPTVE 5553
>AL110477-11|CAB54323.1| 489|Caenorhabditis elegans Hypothetical
protein Y113G7B.16 protein.
Length = 489
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -1
Query: 384 SAGR*IQSEAPLLVTTDVKLVDPESLKATDVEWRYTEEGDKV 259
S G + AP+L + L+ L T EW+Y ++ DKV
Sbjct: 213 SLGAAPKDAAPILPI--IGLIGERGLDVTTYEWKYNQKPDKV 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,334,970
Number of Sequences: 27780
Number of extensions: 161567
Number of successful extensions: 497
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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