Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_A23
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 247 8e-66
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 31 0.66
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 29 3.5
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 6.2
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 6.2
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 8.2
AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 247 bits (604), Expect = 8e-66
Identities = 119/215 (55%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Frame = -3
Query: 750 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGX 571
YNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 44 YNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGL 103
Query: 570 XXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGA 394
++YNVE D P F+ LD+GLARTTTG+++F
Sbjct: 104 LLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAV 161
Query: 393 MKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQ 214
MKG DGG+NVPHS RF G+D ESK++NAE HR I G HVA+YM L+++DED +KRQ
Sbjct: 162 MKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQ 221
Query: 213 FSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKE 109
FSK++ G+ AD + A Y+K H AIRAD S K+
Sbjct: 222 FSKFLAAGLNADNLVATYQKVHSAIRADASPAAKK 256
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -3
Query: 489 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 313
N EP++ G F C+L TT+G+R G + L + ++FPG +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 312 F 310
F
Sbjct: 128 F 128
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = -3
Query: 201 IKLGVTADAIEAIYKKAHEAIRADPSHKKKELQERLGQTEALEQTQANIGREXKQNQAK 25
I++G ++++ + + E IR +KE +ER + A+EQ +A++ E +Q A+
Sbjct: 125 IEMGAKLNSLQGVVDEQEETIR------RKEAEERSVKIAAIEQARADLSAEFEQAVAE 177
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -3
Query: 750 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 631
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/74 (31%), Positives = 40/74 (54%)
Frame = -1
Query: 242 RMMRILSRDNSAST*N*ESLQMLLKPSTRKPMKPSVRIHPTRRKSYKKDSVKQKRWNKRK 63
R +R +S D+S+++ ES + + +K +K S + ++K KK+ K K+ NK K
Sbjct: 267 RAVRNVSEDDSSTSS--ESEESDFEQKKKKKVKKSKKSKKDKKKE-KKEKKKSKKANKEK 323
Query: 62 LTLAERXNRIKQKK 21
ER R +Q+K
Sbjct: 324 ---EERRARREQRK 334
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 603 SDQPSHHNVATHVNKQRTQYGHLQSESRP 689
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 603 SDQPSHHNVATHVNKQRTQYGHLQSESRP 689
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 188 SLQMLLKPSTRKPMKPSVRIHPTRRKSYKKDSVKQKRWNKR 66
S Q KP TR+ + ++R H RRKS+ S+K N +
Sbjct: 1303 SAQQQTKPKTRR--ERALRAHMNRRKSFASASIKFDNSNSK 1341
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 603 SDQPSHHNVATHVNKQRTQYGHLQSESRP 689
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 188 SLQMLLKPSTRKPMKPSVRIHPTRRKSYKKDSVKQKRWNKR 66
S Q KP TR+ + ++R H RRKS+ S+K N +
Sbjct: 1303 SAQQQTKPKTRR--ERALRAHMNRRKSFASASIKFDNSNSK 1341
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 188 SLQMLLKPSTRKPMKPSVRIHPTRRKSYKKDSVKQKRWNKR 66
S Q KP TR+ + ++R H RRKS+ S+K N +
Sbjct: 1303 SAQQQTKPKTRR--ERALRAHMNRRKSFASASIKFDNSNSK 1341
>AF125951-3|AAY86273.1| 244|Caenorhabditis elegans Hypothetical
protein D2063.4 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 160 VDGFNSICSDS*FYVLAELSLERILIILFK--TSHVFSNMQTKDVSPVYFSIELF 318
VDGF ++CS S V + L ++++ +L + +HV ++ ++++ + IE++
Sbjct: 53 VDGFRNVCSGSDLSVRSNLDVKQLSELLKEDPCTHVAGDVVIENLTDIAIPIEVY 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,611,742
Number of Sequences: 27780
Number of extensions: 342717
Number of successful extensions: 1085
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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