Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_A17
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033630-1|AAH33630.1|  344|Homo sapiens sorting nexin 16 protein.     31   4.4  
AF305779-1|AAG25676.1|  343|Homo sapiens sorting nexin 16 protein.     31   4.4  

>BC033630-1|AAH33630.1|  344|Homo sapiens sorting nexin 16 protein.
          Length = 344

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 670 PMSLGNSVASKW*KNFSNRSSSFGANSIQTNKS 572
           PM +GNS AS +  N + RSSSFG+ S  +N S
Sbjct: 9   PMPIGNS-ASSFTTNRNQRSSSFGSVSTSSNSS 40


>AF305779-1|AAG25676.1|  343|Homo sapiens sorting nexin 16 protein.
          Length = 343

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -1

Query: 670 PMSLGNSVASKW*KNFSNRSSSFGANSIQTNKS 572
           PM +GNS AS +  N + RSSSFG+ S  +N S
Sbjct: 9   PMPIGNS-ASSFTTNRNQRSSSFGSVSTSSNSS 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,867,462
Number of Sequences: 237096
Number of extensions: 1514338
Number of successful extensions: 2597
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2597
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)