Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_A16
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1 ... 253 2e-68
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 27 2.4
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 27 3.1
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 27 4.1
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 26 5.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 7.2
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 26 7.2
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 25 9.5
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.5
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 25 9.5
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 9.5
>SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 253 bits (619), Expect = 2e-68
Identities = 132/257 (51%), Positives = 175/257 (68%), Gaps = 2/257 (0%)
Frame = -3
Query: 802 DLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAI 623
D+FI +KS+ L+VSEE + ++ V++ G Y V DP+DGSSNI+ VSVG+IF I
Sbjct: 96 DIFITAMKSNGCCKLIVSEEEEDLIVVDSN--GSYAVTCDPIDGSSNIDAGVSVGTIFGI 153
Query: 622 YKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILT 443
YK + SD L+PG+E+VAAGY +YG++ ++L+ G VNGF D IGEFILT
Sbjct: 154 YKLRPGSQGDISDVLRPGKEMVAAGYTMYGASAHLLLT--TGHRVNGFTLDTDIGEFILT 211
Query: 442 DPNMKIPEKGKIYSINEGYAAEWDKGLQDYIED-KKRPKTGKAYGARYVGSMVADVHRTI 266
NMK+P + IYSINEGY A WD+ + +I K+ K Y ARY+GSMVAD+HRTI
Sbjct: 212 HRNMKMPLQHSIYSINEGYTAFWDEKIARFIAHLKESTPDKKPYSARYIGSMVADMHRTI 271
Query: 265 KYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVP-ILDIVPSSIHQRVP 89
YGG+F YP +K NGKLRLLYEC PM+F+V +AGG+A N K ILD+VP ++H +
Sbjct: 272 LYGGLFAYPCSK-GNNGKLRLLYECFPMAFLVEQAGGIAVNDKGDRILDLVPKTLHGKSS 330
Query: 88 CDLGSKKDVEEXLNDLK 38
LGSK +VEE +N +K
Sbjct: 331 IWLGSKHEVEEYINFIK 347
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 413 SFLRYFHVRVGKNELSYRRVVHEAVHALALSQRQDHHGSRTIQGI 547
SFL +H GKN R V E L L + +D+ R IQ +
Sbjct: 47 SFLSRYHANEGKNAEPVRFNVGEQEAILLLKKGEDNEFDRCIQAL 91
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 108 DEGTMSRIGTFPFVARPPASVTMNDIGL 191
+ G RIGTFPF A A M+ GL
Sbjct: 413 ESGIKYRIGTFPFSANSRAKTNMDADGL 440
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 477 MKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPG-FNASDSTGSPSD 611
+ P+PFP+ TI+ P + A S G F+ D TG+P D
Sbjct: 246 LSSLVPIPFPAGPTIIRMHPKLSTTAVVCSCSGQFHIVD-TGNPLD 290
>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 542 LVWFCYHDGLVAGKGQGRERLHVRPFDRRVHSYRP 438
L+W Y DG V GK + + L P R Y P
Sbjct: 65 LIWLIYDDGFVTGKDRQKRWLRNAPPYRWFCHYFP 99
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +3
Query: 492 PLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPSDFFL*IAKIDPTDTRHSMLEE 671
P+P P+ K V P P+ ++ + S SPS +A P R S+
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP--ARTSVSRS 1285
Query: 672 PSRGSKHTTYLPLRSVS 722
S+ +H T R S
Sbjct: 1286 KSKAERHETSTSSRKSS 1302
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 630 KIDPTDTRHSMLEEPSRGSKHTTYLPLRSVSTCKTVWFS 746
K+D D + +L SR +T +P + +S+C+ +W S
Sbjct: 227 KMDQFDLKSGVLSFISRDP--STQVPYKDMSSCEALWIS 263
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.8 bits (54), Expect = 7.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Frame = +2
Query: 251 YSSVFYSP--VHISNHG---ADVTSAIRFAGFRALLILDVVLQTFIPFGCVTLIYRINFS 415
YS + P VHI G + + A G L + + +T + FGC+T+++ S
Sbjct: 4 YSPLSSGPADVHIGKAGFFSSVINLANTILGAGILSLPNAFTKTGLLFGCLTIVFSAFAS 63
Query: 416 FLRYFHV-----RVGKNELSYRRVVHEAVHALAL 502
FL + V R+ + + S+ V +LA+
Sbjct: 64 FLGLYFVSQCAARLPRGKASFAAVAKHTFPSLAV 97
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 465 EGSYMKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPS 608
EGS P LP D +I AEP + +A P + GSPS
Sbjct: 332 EGSPSLPIPILPKMKDTSIPAAEPASSTTSARDQTP--STPKDVGSPS 377
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 447 RMNSPIEGSYMKPFTPLP 500
+MN P G Y PF+PLP
Sbjct: 291 KMNVPPMGMYPLPFSPLP 308
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 447 RMNSPIEGSYMKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPSD 611
+ N+P S +P TPL P +T+ P+ T + P F+++ S S +
Sbjct: 44 KQNTPSPNSECRPLTPLNSPFRRTVEGDTANLQAPSPT-ACPSFDSASSIKSSKE 97
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 317 RFAGFRALLILDVVLQTFIPFGCVTLIYRIN---FSFLRYFHVRVGKNELSYRRVVHEAV 487
RF + A ++ + ++ V LIY N FS + H V +NEL V EA
Sbjct: 432 RFGDYLADQVVAPIRESVSQVLGVALIYVPNDSVFSMYKVLHSLVFQNELGLTNTVWEAA 491
Query: 488 H 490
H
Sbjct: 492 H 492
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,628,410
Number of Sequences: 5004
Number of extensions: 82314
Number of successful extensions: 242
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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