Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_A16
(804 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1458 + 37512954-37513112,37513217-37513324,37513357-375134... 295 2e-80
05_04_0448 - 21349877-21349990,21350263-21350338,21350418-213505... 291 4e-79
03_02_0486 - 8811539-8811610,8811725-8812231,8812327-8812551,881... 246 2e-65
06_03_1034 - 27044892-27044983,27045189-27045216,27045514-270459... 173 2e-43
04_02_0036 - 9033411-9033746,9033961-9034032,9034122-9034222,903... 82 6e-16
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184... 31 1.4
07_03_0984 - 23131468-23131679,23132082-23132209,23132300-231323... 29 4.3
07_01_0516 - 3850252-3852870 29 4.3
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 29 4.3
>01_06_1458 +
37512954-37513112,37513217-37513324,37513357-37513431,
37513520-37513581,37513690-37513756,37514161-37514274,
37514357-37514443,37514571-37514641,37514718-37514783,
37514941-37515027,37515127-37515202,37515321-37515424,
37515550-37515583
Length = 369
Score = 295 bits (725), Expect = 2e-80
Identities = 141/250 (56%), Positives = 182/250 (72%), Gaps = 1/250 (0%)
Frame = -3
Query: 802 DLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAI 623
++F+ L SS TC+LVSEE++ V+ RGKY VCFDPLDGSSNI+C VS+G+IF I
Sbjct: 102 EVFVKALVSSGRTCVLVSEEDEEATFVDPALRGKYCVCFDPLDGSSNIDCGVSIGTIFGI 161
Query: 622 YKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILT 443
Y K + + D L+PG+ +VAAGY +YGS+ +VLS G G VNGF DPS+GEFILT
Sbjct: 162 YMIKDKENVTLEDVLQPGKNMVAAGYCMYGSSCTLVLSTGNG--VNGFTLDPSLGEFILT 219
Query: 442 DPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGKA-YGARYVGSMVADVHRTI 266
P++KIP+KGKIYS+NEG A WD+ ++E K PK G + RY+GSMVADVHRT+
Sbjct: 220 HPDIKIPKKGKIYSVNEGNAKNWDEPTAKFVEKCKFPKDGSSPKSLRYIGSMVADVHRTL 279
Query: 265 KYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPC 86
YGG+F+YPA K +PNGKLR+LYE PMSF++ +AGG + GK LD+VP+ IH+R P
Sbjct: 280 LYGGVFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERALDLVPTKIHERSPI 339
Query: 85 DLGSKKDVEE 56
LGS +DVEE
Sbjct: 340 FLGSFEDVEE 349
>05_04_0448 -
21349877-21349990,21350263-21350338,21350418-21350504,
21350706-21350771,21350855-21350925,21351030-21351116,
21351201-21351314,21351612-21351678,21351807-21351868,
21351960-21352085,21352091-21352381
Length = 386
Score = 291 bits (714), Expect = 4e-79
Identities = 139/250 (55%), Positives = 178/250 (71%), Gaps = 1/250 (0%)
Frame = -3
Query: 802 DLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAI 623
++F+ L SS TC+LVSEEN+ + V+ RGKY VCFDPLDGSSNI+C VS+G+IF I
Sbjct: 127 EVFVKALVSSGRTCVLVSEENEEAIIVDAPLRGKYCVCFDPLDGSSNIDCGVSIGTIFGI 186
Query: 622 YKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILT 443
Y K + + D L+PG +++AAGY +YGS+ +VLS G GVNGF DPS+GEFILT
Sbjct: 187 YMIKDKDNVTLDDVLQPGTDMLAAGYCMYGSSCTLVLS--TGNGVNGFTLDPSLGEFILT 244
Query: 442 DPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTGK-AYGARYVGSMVADVHRTI 266
PN+KIP +GKIYS+NEG A WD ++E K P+ G + RY+GSMVADVHRT+
Sbjct: 245 HPNIKIPNRGKIYSVNEGNAKNWDAPTAKFVEKCKFPQDGSPSKSLRYIGSMVADVHRTL 304
Query: 265 KYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVPC 86
YGGIF+YPA + +PNGKLR+LYE PMSF++ +AGG A GK L++VP IH R P
Sbjct: 305 LYGGIFLYPADQKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALELVPRKIHDRSPI 364
Query: 85 DLGSKKDVEE 56
LGS DVE+
Sbjct: 365 FLGSYDDVED 374
>03_02_0486 -
8811539-8811610,8811725-8812231,8812327-8812551,
8812648-8813064
Length = 406
Score = 246 bits (602), Expect = 2e-65
Identities = 129/264 (48%), Positives = 168/264 (63%), Gaps = 15/264 (5%)
Frame = -3
Query: 802 DLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAI 623
++F N LKSS T ++ SEE + VE G Y+V FDPLDGSSNI+ VS GSIF I
Sbjct: 139 EVFSNCLKSSGRTGVIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIFGI 198
Query: 622 YKKKSEG----------DPVESDAL----KPGRELVAAGYALYGSATMMVLSLGKGKGVN 485
Y E D VE + +PG L+AAGY +Y S+ + VL++G G V
Sbjct: 199 YSPNDECLADIADDQNLDQVEQRCIVSVCQPGSNLLAAGYCMYSSSVIFVLTIGTGVYV- 257
Query: 484 GFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRP-KTGKAYGA 308
F DP GEF+LT ++IP+ GKIY+ NEG A WD L+ Y++ K P +GK Y A
Sbjct: 258 -FTLDPMYGEFVLTQEKVQIPKAGKIYAFNEGNYALWDDKLKSYMDSLKEPGPSGKPYSA 316
Query: 307 RYVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPI 128
RY+GS+V D HRT+ YGGI+ YP + + NGKLRLLYEC PMSFIV +AGG ++G I
Sbjct: 317 RYIGSLVGDFHRTLLYGGIYGYPRDQKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRI 376
Query: 127 LDIVPSSIHQRVPCDLGSKKDVEE 56
LDI+P+ IHQRVP +GS ++VE+
Sbjct: 377 LDIMPTEIHQRVPLYIGSVEEVEK 400
>06_03_1034 -
27044892-27044983,27045189-27045216,27045514-27045908,
27046224-27046312,27046352-27046620,27047037-27047270
Length = 368
Score = 173 bits (420), Expect = 2e-43
Identities = 100/251 (39%), Positives = 144/251 (57%), Gaps = 2/251 (0%)
Frame = -3
Query: 802 DLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAI 623
++ ++ L+ S ++ SEEN + V + YVV DPLDGS NIE + G+IF I
Sbjct: 80 EIILSSLRRSGKVAVMASEENHLPIWVSND--SPYVVVTDPLDGSRNIEVSIPTGTIFGI 137
Query: 622 YKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILT 443
Y + +E D + + L S T +V S G G G +GF D GEF+LT
Sbjct: 138 YNRLAELDHLPEEERAQLNSLQ--------SGTHLVAS-GFGAGTHGFTLDHLTGEFVLT 188
Query: 442 DPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPK--TGKAYGARYVGSMVADVHRT 269
P+++IP +G+IYS+N+ +W +GL+ YI+ ++ K K Y ARYV S+VAD HRT
Sbjct: 189 HPSIQIPPRGQIYSVNDARYFDWPEGLRKYIDTIRQGKGQHPKKYSARYVCSLVADFHRT 248
Query: 268 IKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSIHQRVP 89
+ YGG+ M P LRL+YE NP+SF+ +AGG ++GK IL I P +HQR+P
Sbjct: 249 LIYGGVAM------NPRDHLRLVYEANPLSFLAEQAGGRGSDGKSRILSIQPVKLHQRLP 302
Query: 88 CDLGSKKDVEE 56
LG +D+ E
Sbjct: 303 LFLGGMEDMLE 313
>04_02_0036 -
9033411-9033746,9033961-9034032,9034122-9034222,
9034309-9034530,9034832-9034913,9035029-9035214,
9035311-9035445,9035543-9035641
Length = 410
Score = 81.8 bits (193), Expect = 6e-16
Identities = 78/268 (29%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Frame = -3
Query: 799 LFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIY 620
L L+ S SEE + + G + V FDPLDGSS ++ +VG+IF ++
Sbjct: 137 LLFEALEYSHVCKYACSEEVPELQDMGGPVDGGFSVAFDPLDGSSIVDTNFTVGTIFGVW 196
Query: 619 KKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTD 440
GD + G + VAA +YG T +++L G + F+ G++
Sbjct: 197 P----GDKLTGVT---GGDQVAAAMGIYGPRTTYIIALKDCPGTHEFLLLDE-GKWQHVQ 248
Query: 439 PNMKIPEKGKIYSINEGYAA----EWDKGLQDYIEDKKRPKTGKAYGARYVGSMVADVHR 272
I E GK++S A E+DK + Y+++K Y RY G MV DV++
Sbjct: 249 DTTTIGE-GKMFSPGNLRATFDNPEYDKLINYYVKEK--------YTLRYTGGMVPDVNQ 299
Query: 271 TI--KYG-----GIFMYP-----------ATKSAPNGKLRLLYECNPMSFIVTEAGGLAT 146
KY G FM T KLRLL+E P+ F++ +AGG ++
Sbjct: 300 NCYEKYEMPTLMGSFMMQIIVKEKGIFTNVTSPTAKAKLRLLFEVAPLGFLIEKAGGYSS 359
Query: 145 NGKVPILDIVPSSIHQRVPCDLGSKKDV 62
+GK +LD V +++ +R GSK ++
Sbjct: 360 DGKQSVLDKVINNLDERTQVAYGSKNEI 387
>07_03_1690 -
28716998-28717091,28717203-28717897,28718264-28718446,
28718552-28719585,28719805-28719978,28720051-28720168,
28720339-28720521,28720647-28720739,28720981-28721166,
28722247-28722507
Length = 1006
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = -3
Query: 709 RGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGS 530
R KY+ DP+ S+N+ VS GS + I S G S L +L+ ++G
Sbjct: 316 RPKYLNIIDPIKSSNNLGRSVSKGSFYRIRGAFSFGAQNLSQILMLPTDLIPT--EIFGF 373
Query: 529 ATMMVLSLGKGK----GVNGFMYDPSI---GEFILTDPNMKIPE 419
+ S G+GK G NG ++PS+ E+ L + + + E
Sbjct: 374 FVNTLKSHGRGKRSDVGNNG-SFEPSLDPESEYALWEDSSDVKE 416
>07_03_0984 -
23131468-23131679,23132082-23132209,23132300-23132365,
23134421-23134515,23135292-23135340,23135428-23135487,
23135580-23135701,23135799-23135840,23135944-23135992,
23136095-23136166,23136638-23136738,23136835-23136910,
23137002-23137081,23137196-23137307,23137391-23137454,
23137540-23137603,23138544-23138570
Length = 472
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 784 LKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSE 605
LKS T L + +Q +L V ++R GKY + + ++E L + S+ A+Y+ +
Sbjct: 51 LKSIVTLALTLLTSSQAILIVWSKRAGKYE--YSVTTANFSVEALKCLLSLIALYRTWNS 108
Query: 604 GDPVESDAL 578
E + L
Sbjct: 109 QGVTEDNRL 117
>07_01_0516 - 3850252-3852870
Length = 872
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +3
Query: 84 SQGTRWCMDEGTMSRIGTFPFVARPPASVTMNDIGLHSY--RSRSFPLGADLVAGYMNIP 257
S+ RW E T ++ P S T + +HS+ R RS P D+ AG
Sbjct: 716 SESARWQCSESTRLKMREKGMRKIPARSWTFHGNSIHSFFARDRSHPQSKDIYAGL---- 771
Query: 258 PYFIVLCTSATMEP 299
I+ C A EP
Sbjct: 772 DVLILECMKAGYEP 785
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 443 GKNELSYRRVVHEAVHALALSQRQDHHGSRTIQGIARSD 559
G + L+ H H + LS+R + SRTIQG+ + D
Sbjct: 81 GNSPLALALYTHWFYHNIDLSERLNTRKSRTIQGLGKMD 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,956,666
Number of Sequences: 37544
Number of extensions: 554557
Number of successful extensions: 1561
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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