Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_A13
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 47 1e-05
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 47 1e-05
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 40 0.003
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 36 0.024
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.51
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 31 1.2
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 31 1.2
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 29 4.7
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 273 FKGALSNVFRGTGGALVLAIYDEIQKFL 300
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 273 FKGALSNVFRGTGGALVLAIYDEIQKFL 300
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 286 FKGALSNVFRGTGGALVLAIYDEIQKFI 313
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 286 FKGALSNVFRGTGGALVLAIYDEIQKFI 313
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
+KG SNV R TGGA VL +YDEI+ ++
Sbjct: 273 YKGGLSNVFRATGGALVLTIYDEIQHLI 300
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKK 683
+KGA +N+ R GGA V+ LY+EI K
Sbjct: 279 YKGALANIFRSAGGALVMALYEEIHK 304
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
F GA N +RGTG A VL +Y+E++K +
Sbjct: 279 FHGALVNAIRGTGAALVLAIYNELQKYM 306
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 760 FKGAXSNVLRGTGGAFVLVLYDEIKKVL 677
++GA +N LR TGGA ++ Y E K +
Sbjct: 271 YRGALTNSLRSTGGALIITFYYEFSKYM 298
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 SAFQLLQNNHVNSXVQHT-NLTSHKCQRYIISF 116
S + LL NNHVNS + H +L + + Y ISF
Sbjct: 109 SLYFLLSNNHVNSIISHKFDLQNDEIMAYYISF 141
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 21 SAFQLLQNNHVNSXVQHT-NLTSHKCQRYIISF 116
S + LL NNHVNS + H +L + + Y ISF
Sbjct: 102 SLYFLLSNNHVNSIISHKFDLQNDEIMAYYISF 134
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 760 FKGAXSNVLR-GTGGAFVLVLYDEI 689
+KG V+R G GGA +L++YDE+
Sbjct: 257 YKGLLPKVMRLGPGGAVMLIVYDEV 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,227,856
Number of Sequences: 27780
Number of extensions: 293761
Number of successful extensions: 470
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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