Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_A09
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0338 + 16916429-16916650,16916728-16917900                       30   2.0  
07_03_1061 + 23651404-23651625,23651764-23652954                       30   2.0  
11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357     29   3.4  
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637           29   4.5  
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934...    29   6.0  
12_01_0911 + 8868557-8868664,8869415-8869420,8869774-8869928,887...    28   7.9  
02_01_0229 + 1524951-1526174                                           28   7.9  
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146...    28   7.9  

>10_08_0338 + 16916429-16916650,16916728-16917900
          Length = 464

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 9/16 (56%), Positives = 15/16 (93%)
 Frame = -1

Query: 739 NDPGKMFVGGLSWQTS 692
           +D GK+F+GG+SW+T+
Sbjct: 3   SDQGKLFIGGISWETT 18


>07_03_1061 + 23651404-23651625,23651764-23652954
          Length = 470

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -1

Query: 736 DPGKMFVGGLSWQTSPGTL 680
           D GK+FVGG+SW+T    L
Sbjct: 4   DSGKLFVGGISWETDEDRL 22


>11_06_0497 + 24337772-24337993,24338042-24338083,24338176-24339357
          Length = 481

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 736 DPGKMFVGGLSWQTSPGTL 680
           D GK+F+GG+SW T+   L
Sbjct: 4   DAGKLFIGGISWDTNEDRL 22


>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
          Length = 309

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 730 GKMFVGGLSWQTSPGTL 680
           G++FVGGLSW T+  TL
Sbjct: 7   GRIFVGGLSWDTTERTL 23


>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
            17793562-17793620,17794135-17795637,17796478-17796720,
            17796831-17797145,17797571-17797573,17798399-17798638,
            17798975-17799259,17799335-17799556,17800105-17800266,
            17800411-17800545,17802452-17802688,17802787-17802960,
            17803692-17803934
          Length = 1384

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 645  FHR*NERDLPPPSVPGLVCQLSPPTN-IFPGSLGTSAGLRATSW 773
            FH  N  D+P   V G VC  + P+N  F G  G  A L A +W
Sbjct: 935  FHSDNVYDIPNVRVNGQVCFTNFPSNTAFRGFGGPQAMLIAENW 978


>12_01_0911 +
           8868557-8868664,8869415-8869420,8869774-8869928,
           8870145-8871031,8871079-8871123,8872528-8872572,
           8873025-8873513,8873603-8873733
          Length = 621

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
 Frame = +2

Query: 629 DARDALPPVK*ARP-----ATAERTWTSLPA 706
           +A DA+PPV  ARP     ATA R W++L A
Sbjct: 324 EADDAVPPVLPARPDYNDTATAHRFWSNLTA 354


>02_01_0229 + 1524951-1526174
          Length = 407

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 629 DARDALPPVK*ARPATAERTWTSLPAESSDEHLPRV 736
           DAR    P   A P    R+W+ LP E + E L RV
Sbjct: 7   DARPTKRPRAAAAPPAWSRSWSDLPVEIAGEILGRV 42


>02_01_0224 -
           1461924-1462227,1462602-1462798,1463059-1463213,
           1464101-1464207,1464289-1464375,1465332-1465414,
           1465959-1466027,1466332-1466658,1466744-1466957,
           1467170-1467267,1467516-1467554,1467672-1468160
          Length = 722

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 672 PPPSVPGLVCQLSPP-TNIFPGSLGTSAGL 758
           PPP  P L+  L PP T+ +P S   +A L
Sbjct: 36  PPPPPPDLISYLPPPSTSSYPSSSAAAAAL 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,615,914
Number of Sequences: 37544
Number of extensions: 427742
Number of successful extensions: 1459
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)