Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_A09
(829 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.069
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.069
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.069
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 25 1.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 1.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 1.1
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 2.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 2.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 2.0
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.6
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 4.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.0
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 22 8.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.0
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.7 bits (61), Expect = 0.069
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 650 PVK*ARPATAERTWTSLPAESSDEHLPRVVRHL 748
P+ RPAT E T SLP E L +++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 24.6 bits (51), Expect = 1.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 444 FYRSILMKVTFFNVGK*KYILNLR*KPIFYGYN 346
FY SI+ +T N + Y NL I+Y YN
Sbjct: 26 FYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYN 58
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 325 GGHAGCARILRCHLPTF 275
G GC +LRC +P+F
Sbjct: 141 GASRGCTAVLRCVVPSF 157
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.6 bits (51), Expect = 1.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 325 GGHAGCARILRCHLPTF 275
G GC +LRC +P+F
Sbjct: 141 GASRGCTAVLRCVVPSF 157
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 439 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 528
VE YP + K+ QRL+ I K P F +
Sbjct: 447 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 476
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 439 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 528
VE YP + K+ QRL+ I K P F +
Sbjct: 362 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 391
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 439 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 528
VE YP + K+ QRL+ I K P F +
Sbjct: 681 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 710
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 4.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 248 RLYHHWNSVVYF*NLNSYRRLYRNCYHNITSI 153
R H+ N+ Y N N+Y + Y+NI I
Sbjct: 88 RTIHNNNNYKYNYNNNNYNNNCKKLYYNINYI 119
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +1
Query: 379 IQNIFLFSNVKKRNFHQY*PVERYPIPL 462
++NI L N+KK + + PV+++ +P+
Sbjct: 203 LRNIVL-DNIKKSGYKKPTPVQKHALPI 229
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 209 NLNSYRRLYRNCYHNITSI 153
N N+Y Y+ Y+NI +I
Sbjct: 323 NYNNYNNNYKPLYYNIINI 341
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.8 bits (44), Expect = 8.0
Identities = 6/26 (23%), Positives = 16/26 (61%)
Frame = +3
Query: 318 WPPSHI*LLYYIHKISVFTANSKYIF 395
W P H+ L Y+++ S + +++++
Sbjct: 273 WAPFHVQRLLYVYEDSTYDDINQWVY 298
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 203 NSYRRLYRNCYHNITSI 153
N+Y++LY+N NI I
Sbjct: 111 NNYKKLYKNYIINIEQI 127
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 203 NSYRRLYRNCYHNITSI 153
N+Y++LY+N NI I
Sbjct: 111 NNYKKLYKNYIINIEQI 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,425
Number of Sequences: 438
Number of extensions: 4636
Number of successful extensions: 44
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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