Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_A04
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   160   9e-42
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    55   5e-10
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    40   3e-05
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.6  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  160 bits (389), Expect = 9e-42
 Identities = 71/86 (82%), Positives = 84/86 (97%)
 Frame = -2

Query: 613 FDPDNFLPXRSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRVISDLKESD 434
           FDPDNFLP ++ANRHYYAFVPFSAGPRSCVGRKYAMLKLK++LSTILRNFRV SD+KES+
Sbjct: 460 FDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSDVKESE 519

Query: 433 FKLQADIILKRAEGFQVRLQPRKRMA 356
           F+LQADIILKRA+GF++RL+PRK++A
Sbjct: 520 FRLQADIILKRADGFKIRLEPRKQVA 545


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 55.2 bits (127), Expect = 5e-10
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = -2

Query: 613 FDPDNFLPXRSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRV 458
           FDP+ F     A+RH   ++PF  GPR+C+G ++A+ + KV L TILRN +V
Sbjct: 416 FDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = -2

Query: 553 PFSAGPRSCVGRKYAMLKLKVILSTILRNFRVISDLKESDFKLQADIIL 407
           PF AG R C G+++  L L++IL+ I+R F +I    E +  LQ + IL
Sbjct: 458 PFGAGRRICPGKRFVDLALQLILAKIIREFEII---VEEELDLQFEFIL 503


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 67  VKLFKHMNYLNMNFL 111
           V+L KH NY+ + F+
Sbjct: 159 VELLKHFNYMKVIFI 173


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 509 CVFTSNATSWSS*KRH 556
           C F  NA +W +  RH
Sbjct: 539 CYFRRNAATWKNAVRH 554


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 480 VERITFNLSIAYLRPTQLLGPAEK 551
           V R    LSI++L+  + +GP+E+
Sbjct: 634 VTRGDLPLSISWLKDGRAMGPSER 657


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,917
Number of Sequences: 438
Number of extensions: 2821
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)