Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_A01
         (796 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968...    29   3.2  
10_01_0133 + 1621574-1625779                                           29   5.6  

>04_04_0998 -
           29996117-29996242,29996345-29996486,29996613-29996812,
           29997112-29997497,29997769-29998318,29998949-29999296
          Length = 583

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 307 CNFDGYWVVMLMRICLRYYPSLYPPYVQATVQW 209
           CNF+    ++L  +    YPS  PPY   TV+W
Sbjct: 164 CNFEYLPPLVLTCLLPLSYPSKEPPYFTVTVKW 196


>10_01_0133 + 1621574-1625779
          Length = 1401

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 20   FNSRLRLITFVRGNITHLMKTIQQIKLT 103
            FN  L ++ +V GN  HL   ++Q+K++
Sbjct: 929  FNGMLSMVEWVSGNTWHLFSQLEQVKVS 956


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,196,516
Number of Sequences: 37544
Number of extensions: 302422
Number of successful extensions: 515
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)