Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P21
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    53   3e-07
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    31   0.88 
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    31   0.88 
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    31   0.88 
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical...    30   1.5  
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical...    30   1.5  
Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 19/33 (57%), Positives = 27/33 (81%)
 Frame = +1

Query: 400 PCAWEIKQFLECAQQQHDLSLCDGFNEALRQCK 498
           PC +E +QF++CAQ Q D+SLC+GFN+  +QCK
Sbjct: 118 PCEFEWRQFVDCAQNQSDVSLCNGFNDIFKQCK 150


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 280
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 280
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 280
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 280
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21b protein.
          Length = 1084

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 322 ASQPSNSKQLLQLKPTINTRG-QPAQGPCAWEIKQFLE 432
           ASQPS +  ++ L+PT NT   +PA  P   E  +FLE
Sbjct: 333 ASQPSETSDIIHLRPTCNTSALRPA--PNILEAPEFLE 368


>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
           protein Y105C5B.21a protein.
          Length = 1254

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 322 ASQPSNSKQLLQLKPTINTRG-QPAQGPCAWEIKQFLE 432
           ASQPS +  ++ L+PT NT   +PA  P   E  +FLE
Sbjct: 503 ASQPSETSDIIHLRPTCNTSALRPA--PNILEAPEFLE 538


>Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical
           protein F16H6.3 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +2

Query: 110 STSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 217
           +T+ ++ SCS +   TS+C S +P  DSSS+ AA A
Sbjct: 198 ATTTTQASCSSSGGSTSTCTSYNP--DSSSSCAAWA 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,718,383
Number of Sequences: 27780
Number of extensions: 285642
Number of successful extensions: 711
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)