Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P20
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    35   0.001
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   2.4  
AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding pr...    24   3.2  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 35.1 bits (77), Expect = 0.001
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = +2

Query: 59  CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 184
           C+PG+R + A  G     VPC C      C   +GRC C H T G  C  C
Sbjct: 707 CAPGYRHNPARGGPFMPCVPCDCNKHAEICDSETGRCICQHNTAGDTCDQC 757


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 10/66 (15%)
 Frame = -1

Query: 219 RMSMRSMQPENMQSTQSTPGVRCT----------QQRPERYMQQLQGTCSSPAEAWLTRK 70
           R S R  QP+  Q  Q   G R            QQRP +  QQ Q       E ++  +
Sbjct: 242 RPSQRHRQPQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQ 301

Query: 69  PGEQRR 52
             +QR+
Sbjct: 302 LRQQRQ 307


>AY146741-1|AAO12101.1|  131|Anopheles gambiae odorant-binding
          protein AgamOBP10 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 48 LIFVALLAFASAKP 89
          ++FVALL FA  KP
Sbjct: 6  IVFVALLTFAGVKP 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,720
Number of Sequences: 2352
Number of extensions: 5193
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)