Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P18
         (840 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep: Trans...    38   0.31 
UniRef50_Q8I5A2 Cluster: Putative uncharacterized protein; n=3; ...    35   2.2  
UniRef50_O69534 Cluster: Putative uncharacterized protein MLCB25...    33   8.9  

>UniRef50_Q8ITJ9 Cluster: Transposase; n=7; Arthropoda|Rep:
           Transposase - Bombyx mori (Silk moth)
          Length = 346

 Score = 37.9 bits (84), Expect = 0.31
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -1

Query: 831 MERVSAXIDNWPQHLKDCIAANGDHFE 751
           M+ V A ID+WP+ LK CI  +G HFE
Sbjct: 320 MDLVRAAIDDWPRRLKACIQNHGGHFE 346


>UniRef50_Q8I5A2 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1086

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
 Frame = -3

Query: 721 IYVLN*-HTVKVINVNCNRFFFLIATVFMARLSIYSWTNN----LIVLNYFLNLVKHFIR 557
           +Y LN    +K  ++NC   F+L   +   +  IY + +     L V++   N+ K F  
Sbjct: 531 VYNLNEKRIIKSFHINCKIIFYLFFFILNNKEYIYIYDSEKFYCLYVIDEKKNVYKIFTL 590

Query: 556 KI*W*YNV-----TLMLGFGINKFSTKVQIKRYNKNTVLNLFFNINL 431
            + W Y++      ++   G N+    +Q+K+YN N +LN  ++ N+
Sbjct: 591 SL-WIYHIICFDNNIIFSLG-NENIYNLQLKKYNNNKILNSIYSNNI 635


>UniRef50_O69534 Cluster: Putative uncharacterized protein
           MLCB2548.13; n=1; Mycobacterium leprae|Rep: Putative
           uncharacterized protein MLCB2548.13 - Mycobacterium
           leprae
          Length = 128

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 804 NWPQHLKDCIAANGDHFE*AFYTLNCFIFM 715
           NWP  +   +AANGDH   A ++ +C IF+
Sbjct: 27  NWPVTVSSEVAANGDHVFGAGFSTDCLIFL 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,349,827
Number of Sequences: 1657284
Number of extensions: 12369739
Number of successful extensions: 23837
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23830
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73373641369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)