Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P18
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122190-1|AAM52702.1|  711|Drosophila melanogaster LD44235p pro...    29   7.9  
AE014296-1153|AAO41275.1|  711|Drosophila melanogaster CG10107-P...    29   7.9  
AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-P...    29   7.9  
AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-P...    29   7.9  

>AY122190-1|AAM52702.1|  711|Drosophila melanogaster LD44235p
           protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32  LKCXWXFFHPIVXVSLFX--NLPGHCHTSPQQHNRXXXCIKLXKHISTXMG 178
           L C +    P     +F   N+PGHC   PQQ+N     + L +++    G
Sbjct: 465 LTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVEQFFG 515


>AE014296-1153|AAO41275.1|  711|Drosophila melanogaster CG10107-PB,
           isoform B protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32  LKCXWXFFHPIVXVSLFX--NLPGHCHTSPQQHNRXXXCIKLXKHISTXMG 178
           L C +    P     +F   N+PGHC   PQQ+N     + L +++    G
Sbjct: 465 LTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVEQFFG 515


>AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-PC,
            isoform C protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32   LKCXWXFFHPIVXVSLFX--NLPGHCHTSPQQHNRXXXCIKLXKHISTXMG 178
            L C +    P     +F   N+PGHC   PQQ+N     + L +++    G
Sbjct: 1587 LTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVEQFFG 1637


>AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-PA,
            isoform A protein.
          Length = 1833

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 32   LKCXWXFFHPIVXVSLFX--NLPGHCHTSPQQHNRXXXCIKLXKHISTXMG 178
            L C +    P     +F   N+PGHC   PQQ+N     + L +++    G
Sbjct: 1587 LTCEYRVKKPDAQAHVFNKDNMPGHCVKVPQQNNFTDCGLYLLQYVEQFFG 1637


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,822,313
Number of Sequences: 53049
Number of extensions: 578871
Number of successful extensions: 809
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)