Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P17
         (378 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   3.7  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   3.7  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   3.7  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   3.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   3.7  
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    22   6.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   6.5  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 148 FFVSILNDHTTSVNIKETSYLQLFT 74
           FF ++LN +  SV+     Y+++F+
Sbjct: 364 FFGNLLNSNVDSVDANYVGYIEVFS 388



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = -1

Query: 228 ISHNYFYTRN----EVIIFIAKQL 169
           I+ NYFYT+N    +V IF  +++
Sbjct: 663 INFNYFYTKNMYFKDVFIFHTEEM 686


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 148 FFVSILNDHTTSVNIKETSYLQLFT 74
           FF ++LN +  SV+     Y+++F+
Sbjct: 364 FFGNLLNSNVDSVDANYVGYIEVFS 388



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = -1

Query: 228 ISHNYFYTRN----EVIIFIAKQL 169
           I+ NYFYT+N    +V IF  +++
Sbjct: 663 INFNYFYTKNMYFKDVFIFHTEEM 686


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 148 FFVSILNDHTTSVNIKETSYLQLFT 74
           FF ++LN +  SV+     Y+++F+
Sbjct: 364 FFGNLLNSNVDSVDANYVGYIEVFS 388



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = -1

Query: 228 ISHNYFYTRN----EVIIFIAKQL 169
           I+ NYFYT+N    +V IF  +++
Sbjct: 663 INFNYFYTKNMYFKDVFIFHTEEM 686


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 148 FFVSILNDHTTSVNIKETSYLQLFT 74
           FF ++LN +  SV+     Y+++F+
Sbjct: 364 FFGNLLNSNVDSVDANYVGYIEVFS 388


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -3

Query: 145 FVSILNDHTTSVNIKETSY---LQLFTEKNQKLFHILSSTAMF 26
           F  +L     S  I  T +   L+LF E  QK+ H+L +   F
Sbjct: 695 FGYLLKSEEISTRITHTFFMDDLKLFAETVQKMHHLLKNVQGF 737


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 148 FFVSILNDHTTSVNIKETSYLQLFT 74
           FF ++LN +  SV+     Y+++F+
Sbjct: 32  FFGNLLNSNVDSVDRNYVGYIEVFS 56


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 108  FTEVVWSFKIETKKLRN*MDLIVL 179
            FTE +  F I TKKL+    +I L
Sbjct: 1128 FTEFMRGFHIITKKLKEMYQMITL 1151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,416
Number of Sequences: 2352
Number of extensions: 4176
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)