Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P13
         (833 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13169| Best HMM Match : Band_7 (HMM E-Value=1.4013e-45)            263   1e-70
SB_8661| Best HMM Match : Band_7 (HMM E-Value=3.7e-16)                152   3e-37
SB_10636| Best HMM Match : Band_7 (HMM E-Value=1.1e-05)                32   0.50 
SB_33677| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  

>SB_13169| Best HMM Match : Band_7 (HMM E-Value=1.4013e-45)
          Length = 242

 Score =  263 bits (644), Expect = 1e-70
 Identities = 128/170 (75%), Positives = 139/170 (81%)
 Frame = +1

Query: 118 MAAQLFNRIXXXXXXXXXXXXXXNSALYNVDGGHRAVIFDRFAGVKQLVVGEGTHFFIPW 297
           MAA  FNR+              NSAL+NVDGGHRAVIFDRF GVK  VVGEGTHF IPW
Sbjct: 1   MAASFFNRLAGLGLGVAVVGGVVNSALFNVDGGHRAVIFDRFQGVKPDVVGEGTHFLIPW 60

Query: 298 VQRPIIFDIRSRPRNVPTITGSKDLQNVNITLRILFRPVPDQLPRIYTILGIDYDERVLP 477
           VQRPIIFDIR+RPRNVP  TGSKDLQNVNITLRIL+RP P  LP+IY  LG DYDERVLP
Sbjct: 61  VQRPIIFDIRTRPRNVPVTTGSKDLQNVNITLRILYRPQPQVLPKIYMNLGEDYDERVLP 120

Query: 478 SITSEVLKAVVAQFDAGELITQREIVSQKVNDSLTERAAQFGLILDDISI 627
           SIT+EVLKAVVAQFDAGELITQRE+VSQKV + LTERA+ FGL+LDDIS+
Sbjct: 121 SITTEVLKAVVAQFDAGELITQREMVSQKVQEDLTERASSFGLVLDDISL 170


>SB_8661| Best HMM Match : Band_7 (HMM E-Value=3.7e-16)
          Length = 500

 Score =  152 bits (369), Expect = 3e-37
 Identities = 75/125 (60%), Positives = 99/125 (79%)
 Frame = +1

Query: 367 DLQNVNITLRILFRPVPDQLPRIYTILGIDYDERVLPSITSEVLKAVVAQFDAGELITQR 546
           DLQ VNI LR+L RP  ++LP +Y  LG+D+DERVLPSI +EVLK+VVAQF+A +LIT R
Sbjct: 357 DLQMVNIGLRVLARPEANKLPPMYRKLGLDFDERVLPSIMNEVLKSVVAQFNASQLITMR 416

Query: 547 EIVSQKVNDSLTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKARFLVXKA 726
           + VS  +   L ERA  F +ILDD+SIT L+FGKE+T A+E KQVAQQEA++A+F+V KA
Sbjct: 417 QQVSLLIRRQLMERARDFYIILDDVSITDLSFGKEYTSAIEAKQVAQQEAQRAQFIVEKA 476

Query: 727 EQQKK 741
            Q+++
Sbjct: 477 IQERQ 481


>SB_10636| Best HMM Match : Band_7 (HMM E-Value=1.1e-05)
          Length = 152

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 16/67 (23%), Positives = 38/67 (56%)
 Frame = +1

Query: 529 ELITQREIVSQKVNDSLTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQEAEKAR 708
           E+++QR+ +SQ +  SL E    +G+ ++ I +  +   ++  +A+  +  A +EA +A+
Sbjct: 32  EILSQRDEISQTMQSSLDEATDPWGVKVERIEVKDVRLPQQLQRAMAAEAEATREA-RAK 90

Query: 709 FLVXKAE 729
            +  + E
Sbjct: 91  IIAAEGE 97


>SB_33677| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 414

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 287 SFLGSRGQLYLTSGLDPEMFLLLLEV 364
           S+ GS GQ Y+T GLD E+ +L +++
Sbjct: 366 SYFGSSGQQYVTLGLDEEVQILQVDL 391


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,799,315
Number of Sequences: 59808
Number of extensions: 393753
Number of successful extensions: 913
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)