Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_P12
(458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 100 2e-20
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 100 3e-20
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 99 4e-20
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 89 6e-17
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 56 4e-07
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 55 6e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 48 1e-04
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 42 0.005
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.32
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 35 0.73
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 6.8
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 32 6.8
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 32 6.8
UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome sh... 31 9.0
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 100 bits (239), Expect = 2e-20
Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +2
Query: 122 KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALK 295
K + + R RYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A+K
Sbjct: 27 KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIK 86
Query: 296 RCKHFELGGDKKRKGQMIQF 355
RCKHFELGGDKKRKGQ+IQF
Sbjct: 87 RCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 99.5 bits (237), Expect = 3e-20
Identities = 42/78 (53%), Positives = 54/78 (69%)
Frame = +2
Query: 122 KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 301
K ++ + R RYDRKQ G+GGQ+KPIF IVLR+EC +CK + Q+ +KRC
Sbjct: 28 KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRC 87
Query: 302 KHFELGGDKKRKGQMIQF 355
KHFELGG KK +GQ+IQF
Sbjct: 88 KHFELGGQKKSRGQVIQF 105
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 99.1 bits (236), Expect = 4e-20
Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = +2
Query: 122 KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALK 295
K + + + RYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A+K
Sbjct: 27 KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIK 86
Query: 296 RCKHFELGGDKKRKGQMIQF 355
RCKHFELGGDKKRKGQ+IQF
Sbjct: 87 RCKHFELGGDKKRKGQVIQF 106
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 88.6 bits (210), Expect = 6e-17
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
K+ K+T T K + + + RYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 56.0 bits (129), Expect = 4e-07
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 128 PRKGTL-PRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 304
P K +L + + RYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 305 HFEL 316
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 55.2 bits (127), Expect = 6e-07
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +2
Query: 155 RXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 334
R RYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 335 K 337
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 239 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 340
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 48.0 bits (109), Expect = 1e-04
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 149 RARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 301
+ + RYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 20 QGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 42.3 bits (95), Expect = 0.005
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = +3
Query: 183 VTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RDASTLSLVVTR 329
VTVV P+ SS RR +P R+L SV S L AR DAST S VVTR
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.32
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 287 ALKRCKHFELGGDKKRKG 340
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 35.1 bits (77), Expect = 0.73
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +2
Query: 98 KYTRXHSTKSPRK---GTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADC 268
K+T HS + RK L + R+ R GYGG +P F I LRL C +C
Sbjct: 16 KHT-SHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDEC 74
Query: 269 KVRSQVALKRCKHFEL 316
R K FE+
Sbjct: 75 HKAITPPGIRAKKFEI 90
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 6.8
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -3
Query: 351 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 244
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 31.9 bits (69), Expect = 6.8
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +2
Query: 161 RYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFE 313
R+ ++GYGGQ P + L C DCK + R K FE
Sbjct: 39 RHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKKFNTYGLRVKKFE 89
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 31.9 bits (69), Expect = 6.8
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 122 KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 301
++ ++ + RY RKQ+GYG Q +P VL + C C + R
Sbjct: 26 RAGKRRAMALGERRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRL 85
Query: 302 KHFEL 316
K EL
Sbjct: 86 KRLEL 90
>UniRef50_Q4SVF2 Cluster: Chromosome 7 SCAF13760, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 7 SCAF13760, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 103
Score = 31.5 bits (68), Expect = 9.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 140 CLSLDFLYCXTLCTLWHLHFL 78
C S D L+C +C WH+ +L
Sbjct: 70 CCSFDALFCILMCVFWHVRYL 90
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,672,548
Number of Sequences: 1657284
Number of extensions: 5831646
Number of successful extensions: 14103
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14097
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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