Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P12
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.2  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    20   9.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 183 VTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RD 299
           V +VS   ++ R+  PL+KLC+  +       HR H  D
Sbjct: 136 VEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHCSD 174


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 348 IICPFLFLSPPSSKCLHLFNATCDLTLQSAHSRRSTI 238
           ++C  L L PP+ +   L N    +     H R  T+
Sbjct: 334 VVCESLRLWPPAPQTDRLCNKNFVIEASKPHERTFTV 370


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 206 WVWTDHRNPAVYDHNXF*PWAACLSLDF 123
           W   D++ P V+D   F    AC+S+ +
Sbjct: 153 WFPFDYKQPVVFDLVYFILAFACISIAY 180


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 293 SMQPVISPCNQHTQDGAQ 240
           ++Q   S C+Q  QDG++
Sbjct: 68  ALQTSCSKCSQRQQDGSR 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,580
Number of Sequences: 336
Number of extensions: 1439
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)