Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_P12
(458 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 89 2e-18
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 89 2e-18
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 89 2e-18
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 89 2e-18
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 89 2e-18
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 89 2e-18
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 89 2e-18
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 1e-07
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 31 0.59
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058 29 2.4
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426... 28 3.1
02_01_0043 + 300122-300907,301447-301722,302347-302481 28 4.2
04_03_0783 + 19607871-19607951,19608027-19608074,19608719-196088... 27 5.5
11_03_0226 - 11908455-11908562,11915971-11916240,11916463-119169... 27 9.6
03_05_0671 + 26608953-26609671,26609775-26610495 27 9.6
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 73 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 73 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 40 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 99
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 100 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 88.6 bits (210), Expect = 2e-18
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 KNVNATKYTRXHST--KSPRKGTLPRARXRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 253
KN K+T T K + + + RYDRKQ GYGGQ+KP+F IVL+L
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72
Query: 254 ECADCKVRSQVALKRCKHFELGGDKKRKG 340
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 73 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 239 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 340
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>08_02_0095 - 12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 30.7 bits (66), Expect = 0.59
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 53 SQNSAGRPAKNVNATKYTRXHSTKSPRKGTLPRARXRYDRKQQG 184
+QN A RP +N N K T +TK RK T + + + +QG
Sbjct: 1017 NQNKA-RPKRNNNEEKQTANSATKGKRKATEDKGTNKKQKSKQG 1059
>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
Length = 339
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -1
Query: 383 QWSYLLEAFKIGSSVPFSSCHHQAQSACISSMQPVISPCNQH 258
+W + E F+ G+ S H + S+C P P +QH
Sbjct: 138 RWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQH 179
>03_04_0161 +
17838466-17838551,17842379-17842445,17842537-17842662,
17842756-17842886,17843121-17843220,17843334-17843466,
17843500-17843544,17843545-17843608,17843692-17844469,
17844897-17845229,17845427-17845634,17845733-17845809,
17846168-17846240,17846343-17846413,17846597-17846716,
17846815-17846879,17846974-17847124
Length = 875
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 179 QGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 304
QG GG S +F ++LE ADC + +V RCK
Sbjct: 214 QGIGGFSNCLFTFLFAGVSMDEVKLEQADCDMDERVYCDRCK 255
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 342 CPFLFLSPPSSKCLHLFNATCDLTLQSAH 256
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>04_03_0783 +
19607871-19607951,19608027-19608074,19608719-19608806,
19608887-19608930,19609016-19609099
Length = 114
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 83 FLQDXLRCFGTCTIFECVRHDINKRQK 3
FL L C GT + C+R +NK K
Sbjct: 58 FLSGVLSCIGTAVLAVCLRIQVNKDNK 84
>11_03_0226 -
11908455-11908562,11915971-11916240,11916463-11916946,
11917148-11918060,11918628-11919300
Length = 815
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 50 TSQNSAGRPAKNVNATKYTRXHSTKSPRKGTLPRAR 157
T+ G A+ + + R S+ PRKG LPRAR
Sbjct: 138 TNLKGNGLLARRIVDSVAKRKESSIKPRKGPLPRAR 173
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 284 VALKRCKHFELGGDKKRKGQMIQF*MLLINK 376
+A + CKHFE + R G I+ ++ INK
Sbjct: 357 IAAQDCKHFEAASYEDRNGNSIRNVIVPINK 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,823,221
Number of Sequences: 37544
Number of extensions: 172208
Number of successful extensions: 428
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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