Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_P10
(416 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 4.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 20 9.7
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 241 EINAKIIINTHEMNQ--HKIYINLENIYHVEYKNINI 137
E+ + ++N + Q Y NL YH +Y N I
Sbjct: 698 EVLPENLVNAQQQVQAVRNYYANLYTKYHGQYPNTQI 734
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 5.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1
Query: 338 IYIYIDCCFVLLLFFI 291
I IYI CC ++++ ++
Sbjct: 246 IQIYIPCCMLVIVSWV 261
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 5.6
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -1
Query: 338 IYIYIDCCFVLLLFFI 291
I IYI CC ++++ ++
Sbjct: 246 IQIYIPCCMLVIVSWV 261
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 7.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 229 KIIINTHEMNQHKIYINLENIYHVEYKNININYN 128
KII + ++ Y N N Y+ YK + YN
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNYNTNYKKLQY-YN 112
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.2 bits (40), Expect = 9.7
Identities = 5/15 (33%), Positives = 11/15 (73%)
Frame = -2
Query: 211 HEMNQHKIYINLENI 167
H ++ HK ++ +EN+
Sbjct: 554 HNLSLHKCFMRVENV 568
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,809
Number of Sequences: 438
Number of extensions: 1315
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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