Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_P08
(819 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 120 3e-28
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 114 2e-26
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 97 3e-21
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 30 0.34
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 30 0.34
SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces p... 28 1.4
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 27 3.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 3.2
SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|c... 26 5.6
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 25 9.8
SPAC343.06c |||scramblase|Schizosaccharomyces pombe|chr 1|||Manual 25 9.8
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 9.8
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 120 bits (288), Expect = 3e-28
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 10/183 (5%)
Frame = +1
Query: 181 ESYSGFLTVNKQYNSNTFFWYFPVRNKPKDSTPWIIWLQGGPGASSLAGLFDEIGPFSYN 360
+ Y+G+L V + + FFW+F RN P++ P ++WL GGPG SSL GLF E+GP S N
Sbjct: 587 KQYTGYLDVED--DRHLFFWFFESRNDPEND-PVVLWLNGGPGCSSLTGLFMELGPSSIN 643
Query: 361 KKNDTIEEREWTWLKGYSMLFIDNPVGAGFSFTDSNDGFVKNMDECASDLYTALKQFLII 540
+ E +W S++F+D P+ GFS + D V + D+Y L F
Sbjct: 644 IETLKPEYNPHSWNSNASVIFLDQPINTGFS---NGDDSVLDTVTAGKDVYAFLNLFFAK 700
Query: 541 FPELRTAPLYIAGESYAGRYIPPFAMKLAEQDLNIGTF----------EVNLQGIIMGNP 690
FP+ +IAGESYAG YIP FA ++ E + F +NL+ +++GN
Sbjct: 701 FPQYAHLDFHIAGESYAGHYIPQFAKEIMEHNQGANFFVASGYEMEKQYINLKSVLIGNG 760
Query: 691 VVD 699
+ D
Sbjct: 761 LTD 763
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 114 bits (274), Expect = 2e-26
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Frame = +1
Query: 157 NRSIALEYESYSGFLTVNKQYNSNTFFWYFPVRNKPKDSTPWIIWLQGGPGASSLAGLFD 336
N + E ++G L Q + + FFW F KP+ I+WL GGPG SS G
Sbjct: 36 NEPVDYEGRMHAGHLNQTDQLDGDLFFWMFE-SVKPEYEHRSILWLNGGPGCSSEDGSLM 94
Query: 337 EIGPFSYNKKNDTIEEREWTWLKGYSMLFIDNPVGAGFSFTDSNDGFVKNMDECASDLYT 516
E+GPF + N+T + W + ++LF+D P+G G+S++ + D F N ++ A+D
Sbjct: 95 EVGPFRLDD-NNTFQLNPGRWDELGNLLFVDQPLGTGYSYSLAKD-FQSNNEKMANDFSI 152
Query: 517 ALKQFLIIFPELRTAPLYIAGESYAGRYIPPFAMKLAEQDLNIGTFEVNLQGIIMGNPVV 696
++FL FPE +IAGES+AG+YIP A KL E++L VNL G+ +GN +
Sbjct: 153 FFEKFLEEFPERANDEWFIAGESFAGQYIPHIAAKLKEKNL------VNLGGLAIGNGWI 206
Query: 697 DRYS-VANYTSTFXQWGLI 750
+ S Y + + G++
Sbjct: 207 NPLSHYETYLNYLVEKGMV 225
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 96.7 bits (230), Expect = 3e-21
Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Frame = +1
Query: 181 ESYSGFLTVNKQYNSNTFFWYFPVRNKPKDSTPWIIWLQGGPGASSLAGLFDEIGPFSYN 360
E YSG+L N + + F+ Y P DS +I+WLQGGPG + G F E GP +
Sbjct: 73 ELYSGYLEANS--DKSLFYTYAPA---VVDSETFIVWLQGGPGCAGTLGFFSENGPIEIS 127
Query: 361 KKNDTIEEREWTWLKGYSMLFIDNPVGAGFSFTDSNDGFVKNMDECASDLYTALKQFLII 540
+ + + +W +ML++D P G G+S + ++E +SD ALK F
Sbjct: 128 QSSPSPSLNPESWTNFANMLWLDQPFGTGYS--QGQAAYTTTIEEASSDFVNALKSFYQK 185
Query: 541 FPELRTAPLYIAGESYAGRYIPPFA-MKLAEQDLNIGTFEVNLQGIIMG 684
FP L LY+ GESY + FA L+E LNI V GI+ G
Sbjct: 186 FPHLMKKKLYLVGESYGSIWSANFAEALLSEPSLNINFMGV---GIVSG 231
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 30.3 bits (65), Expect = 0.34
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 699 IHHWITHYYSLKIDFKGANI-EVLLRQFHGKRW 604
IH HYYSL+I++K + E++L H + W
Sbjct: 192 IHGLGRHYYSLRINYKKTELEEIMLLNLHKQPW 224
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 30.3 bits (65), Expect = 0.34
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 688 PVVDRYSVANYTSTFXQWGLIXTQGAMSVKSLXDQYIKAILDG 816
P VD Y V + ++ QW L+ G++ ++ QY+ A+LDG
Sbjct: 750 PYVD-YVVETFVASSTQWRLMRDVGSIRLQYACLQYMLAVLDG 791
>SPBC685.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 313 SSLAGLFDEIGPFSYNKKNDTIEEREWTWLKGYSMLFIDN 432
SS+ G+ DEI + +K N + R + K Y + F+DN
Sbjct: 169 SSIFGIIDEISLNNPSKSNFNSDIRNYFNFKMYDLSFVDN 208
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 27.1 bits (57), Expect = 3.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 370 RSSYCTRKDRFRQTNPPNYLPR 305
+SSYC+ D FR +YLP+
Sbjct: 399 KSSYCSHMDAFRWVKRDSYLPQ 420
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 235 FWYFPVRNKPKDSTPWIIWLQG 300
FWYF V N P TP +L+G
Sbjct: 435 FWYFTVYNSPTIYTPNFHYLEG 456
>SPCC895.03c |||SUA5/yciO/yrdC family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 408
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 345 TDFVKQTRQTTCPGSSLKPYNPRGRILWFIPHRE 244
TDF+ QT PG + Y+P ++L F+ + E
Sbjct: 276 TDFIPQT-----PGMKYRHYSPTAKVLLFVNYTE 304
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 25.4 bits (53), Expect = 9.8
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 346 PFSYNKKNDTIEEREWTWLKGYSMLFIDNPVGAGFSFTDSNDGFVKNMDECASDLYTALK 525
PFS + N+T + W K + D+P F++ D FV + D + +LK
Sbjct: 442 PFSGSNVNETWSNLK-NWRKCFQRPHYDDPRDLEFNWRDDAWDFVCHCITDPKDRFCSLK 500
Query: 526 QFL 534
Q +
Sbjct: 501 QVM 503
>SPAC343.06c |||scramblase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 9.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 613 AMKLAEQDLNIGTFEVNLQGIIMGNPVVDRYSVANYTSTFXQWGLIXTQGAMSVKS 780
A L QD+ I ++ + + +G +RY + N G I QGA S+ S
Sbjct: 70 AAPLLSQDVLIVERQLEMMNVFLGYEQANRYVILNQQG--QHLGYIAEQGASSILS 123
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 723 SIIGNTVTIHHWITH-YYSLKIDFKGANIEVLLRQFHGKRWNVS 595
S++GN +TI+H H Y S KI + + +++ R W VS
Sbjct: 1027 SLVGNNITIYHPPPHGYLSYKILLR--DDDMIYRLAPSGEWGVS 1068
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,505,005
Number of Sequences: 5004
Number of extensions: 78466
Number of successful extensions: 235
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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