Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_P06
(648 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57900| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_49434| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=3.6e-08) 50 1e-06
SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 32 0.35
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 32 0.35
SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011) 31 0.61
SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 31 0.81
SB_3487| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8368| Best HMM Match : VWA (HMM E-Value=0) 29 2.5
SB_23094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 29 4.3
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_10761| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_26932| Best HMM Match : rve (HMM E-Value=3.2) 28 5.7
SB_8791| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_4664| Best HMM Match : DSPc (HMM E-Value=7.2) 28 5.7
SB_36434| Best HMM Match : Ins_allergen_rp (HMM E-Value=5.7) 28 5.7
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 28 5.7
SB_18237| Best HMM Match : Histone (HMM E-Value=1.8e-16) 28 7.5
SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19) 28 7.5
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_44649| Best HMM Match : Orthopox_F6 (HMM E-Value=4.2) 27 9.9
SB_14745| Best HMM Match : Histone (HMM E-Value=5.8e-19) 27 9.9
SB_14358| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 27 9.9
SB_8972| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_57900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/64 (39%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 ATEADNNKLEFELNSEEQVHEKKQKTEV-IRSTKLPIARIKNIMKMDPDVNIVSSDAVFL 429
A E++N + + N++E++H Q+ E R T+ P R++N+MK+DPD+ + + +AVFL
Sbjct: 3 AEESEN--MATQDNNDEELHPATQEEEKPSRMTQFPQTRVRNMMKLDPDLQLANKEAVFL 60
Query: 430 VTKA 441
VT+A
Sbjct: 61 VTRA 64
>SB_49434| Best HMM Match : CBFD_NFYB_HMF (HMM E-Value=3.6e-08)
Length = 120
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/74 (32%), Positives = 45/74 (60%)
Frame = +1
Query: 346 TKLPIARIKNIMKMDPDVNIVSSDAVFLVTKATEMFLETIVKETYAFTSSNKRKVISKKD 525
T+LP+++IK I+K PD+ +S +++FL+ ++TE+F+ + A +K +S K
Sbjct: 14 TQLPLSKIKTILKSSPDLANISQESLFLIARSTEVFVNYLA--VAALKKEESKKHLSYKA 71
Query: 526 LELVIDKVDCLCFL 567
L +++ D L FL
Sbjct: 72 LAQLVEDEDALQFL 85
>SB_16496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1275
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 172 EDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTK 351
E +++ E +S+ ENE L ++ +E DN + N+ E V E K +
Sbjct: 915 ESTEVAAFGEEVQSFSENETLCVSIKPDSEGDNEEHTNGNNNAETV-EHKNADMACSQPE 973
Query: 352 LPIARIKNIMKMDPDVNI 405
L A K+I K P+V I
Sbjct: 974 LTKAEDKSIAKRKPEVTI 991
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 133 PSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVH 312
P+S+ EEE E+V+ + E E E E + E E + K E E EE+
Sbjct: 190 PASVVEEEEEEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEE 249
Query: 313 EKKQKTE 333
E++++ E
Sbjct: 250 EEEEEEE 256
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 32.3 bits (70), Expect = 0.35
Identities = 29/135 (21%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Frame = +1
Query: 139 SLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEK 318
S++ + ++ E +++ + H L +E + ALT+ TEA+N++L+ EL +Q+
Sbjct: 269 SVEQLRKQHAEEMIEVENYVSHIRQ-LSDE--REALTQDTEAENDQLKAEL---QQMKMD 322
Query: 319 KQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTK--ATEMFLETIVKETYAFTS 492
+ V+ + + ++ D N V + FL+ + + + + KE F
Sbjct: 323 QIAGTVVSEGICDMLMEAGLTQVAKDTNSVKNQISFLLKERVGNKETIRKLEKEKDLFQK 382
Query: 493 SNKRKVISKKDLELV 537
+KK +E+V
Sbjct: 383 EASSGQANKKAMEMV 397
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 154 SEEECHED----VDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKK 321
+EE+ H++ +D S++TE + EN+ L+ T+ TE + ++ +E V+ ++
Sbjct: 172 AEEKYHKNNENVLDASELTEREQKQTENDQLEDKTTQTTETPQKPKQHDV-AETNVNTRR 230
Query: 322 QKTEVIR 342
+K E R
Sbjct: 231 RKKENAR 237
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +1
Query: 172 EDVDISD--ITEH-SESYLENEHLKFALTEATEADNNKLEFELNSE-EQVHEKKQKTEVI 339
ED++I + H +E E LK L +A E D +L+ E+ S EQ+HE + EVI
Sbjct: 2514 EDLEIERDRVKRHLAELTAEKNTLKTRL-DARELDIVRLQSEVKSSVEQLHEVRTHVEVI 2572
Query: 340 RSTKLPIARIKNIMK 384
R+ + ++ KN ++
Sbjct: 2573 RTENVSSSKDKNFIE 2587
>SB_36579| Best HMM Match : C1_1 (HMM E-Value=0.00011)
Length = 633
Score = 31.5 bits (68), Expect = 0.61
Identities = 34/142 (23%), Positives = 61/142 (42%)
Frame = +1
Query: 109 FTLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFE 288
F+ K + L+ +E+ + DI + + E+ + LT T+AD+ +L
Sbjct: 164 FSTLYKTQVKELREEVDEKTKQVTDIESKVKQLKEERESLSAQLELT-LTKADSEQLARS 222
Query: 289 LNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKATEMFLETIV 468
+ E+ +K+KT + K IAR K+ M D I + L + T + +
Sbjct: 223 IAEEQYSDLEKEKTMIELEVKELIARHKSEMS-DKAAQITQLEE--LNQQMTSSLDQKVQ 279
Query: 469 KETYAFTSSNKRKVISKKDLEL 534
++ +S NK K KK L +
Sbjct: 280 EKEELNSSINKLKAALKKSLHI 301
>SB_36081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 118 HRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTE 252
H+K K S + EE E+ DIS + E+ E + + K A TE
Sbjct: 377 HKKEKKSKKEKTKTEESDEEADISAVLENGEKKKKKKKKKKAKTE 421
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 172 EDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTE 333
ED +S+ T E+ EN LK + DN L +L+S Q+H+K + E
Sbjct: 514 EDNSLSE-TSQMENLRENLKLKQMTVQQLNKDNEALREKLSSSVQIHDKVAELE 566
>SB_3487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 250 EATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIM 381
+A + DN+K+ +L+S E V E+K +TE+ +S ++KN++
Sbjct: 59 KALKEDNDKMSQDLSSLE-VLEQKSETEIRKSAPFATNKVKNLI 101
>SB_8368| Best HMM Match : VWA (HMM E-Value=0)
Length = 771
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +1
Query: 325 KTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKAT 444
K + +R ++ +AR++ KM PDV +VS A+ L T T
Sbjct: 73 KRQGLRPSEDFVARLRTSAKMTPDVRLVSGVALMLRTART 112
>SB_23094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 265 DNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVF-LVTKA 441
DN K +EL + ++ ++ S +P+ ++K + + +N VF + T A
Sbjct: 26 DNLKAPWELLEHRVKYYEELIKAMLESINVPLDKLKFVKGTEYQLNKDYILDVFKMTTIA 85
Query: 442 TEMFLETIVKETYAFTSSNKRKVISKKDLELVIDKVD 552
TE E +K F ++RK+ + + + ID +D
Sbjct: 86 TEALDEEYLKVDAQFGGVDQRKIFTFAEKDSKIDMLD 122
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 97 KSLLFTLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNK 276
KSL T H K K + ++ +E+ E+ + + E+ E E K E E D K
Sbjct: 1870 KSLQKTFHPKKKENEEEDDKKEKKEENEEEEKKKKKKEN--EEEDDKKNNKEENEEDEKK 1927
Query: 277 LEFELNSEEQVHEKKQKTE 333
+ + E+ +KK+KT+
Sbjct: 1928 EKKKKEENEEEDDKKKKTK 1946
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/101 (26%), Positives = 44/101 (43%)
Frame = +1
Query: 115 LHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELN 294
L R KP + SEEE E+ + + TE + + LK TE + D+ L E +
Sbjct: 636 LPRTKKPEKEEEESEEESEEESEEEEETEK----VNKDALKAKATEKSN-DSLCLSEEES 690
Query: 295 SEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSD 417
EE+ E+ ++ E + A+I + + V V D
Sbjct: 691 EEEESEEESEEDEEEGAKPSASAKIAKTSETENKVPKVDKD 731
>SB_10761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 316 KKQKTEVIRSTKLPIARIKNIMKMDPDVNI-VSSDAVFLVTKATEMFLETIVKETYAFTS 492
K QK+ + K+P R+ + + +++ DA+ + +ATE F+ + +
Sbjct: 92 KLQKSTELLIKKVPFQRLVREISQNYRLDLRFHPDALLALQEATEAFIVGVFDDVNLCAI 151
Query: 493 SNKRKVISKKDLELVI 540
KR I KDL L +
Sbjct: 152 HAKRVTIMPKDLHLAL 167
>SB_26932| Best HMM Match : rve (HMM E-Value=3.2)
Length = 241
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +1
Query: 301 EQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKAT 444
E++ EKK+K ++ S + I+N +D + ++ + ++V K+T
Sbjct: 17 EELKEKKEKKDIALSDNDKLKIIRNKWNVDEEGRVIDAKGKYVVHKST 64
>SB_8791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/71 (21%), Positives = 34/71 (47%)
Frame = +1
Query: 103 LLFTLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLE 282
L LH+ Y + +++++ + D SD+T +E + ++ E TE + ++
Sbjct: 131 LFMNLHKPYIEALAKSITKTKQATPKDASDVTTPAEPPRRSSRTSVSIEEGTEEEAGEVS 190
Query: 283 FELNSEEQVHE 315
+ +EE+ E
Sbjct: 191 EKGETEEEESE 201
>SB_4664| Best HMM Match : DSPc (HMM E-Value=7.2)
Length = 247
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 187 SDITEHSESYLENEHLKFALTEATEADNNK 276
SD T +S+ ENE L F + TE DN +
Sbjct: 107 SDATADVQSFSENETLCFTIKPDTEGDNKR 136
>SB_36434| Best HMM Match : Ins_allergen_rp (HMM E-Value=5.7)
Length = 165
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +1
Query: 325 KTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKATEMFLETIVKETYAFTSSNKR 504
K ++ + K A + + ++ D I+SS L ++ F +++ FT+ N R
Sbjct: 14 KEKLTDAKKFATATLDELKQIPQD--ILSSAKEALSGMTSQQF-SWLIQRFKKFTAQNLR 70
Query: 505 KVISKKDLELVIDKVDCL 558
++IS DL+ D +D L
Sbjct: 71 QLISNIDLQAFFDNIDGL 88
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 157 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADN-NKLEFE----LNSEEQVHEKK 321
E+E ++VD+ + H S LE HLK E D+ N + FE L +E ++ +KK
Sbjct: 648 EDEETDEVDVLEEQRHRISSLEG-HLKLVEKARLEDDDRNNINFEEYKRLRNELEILKKK 706
Query: 322 QKTEVIRSTKL 354
+ E ++ +
Sbjct: 707 RAQEELQEAMM 717
>SB_18237| Best HMM Match : Histone (HMM E-Value=1.8e-16)
Length = 103
Score = 27.9 bits (59), Expect = 7.5
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +1
Query: 445 EMFLETIVKETYAFTSSNKRKVISKKDLELVIDK 546
++FLE ++++ +T KRK ++ D+ V+ +
Sbjct: 60 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYVLKR 93
>SB_53565| Best HMM Match : Amino_oxidase (HMM E-Value=9.7e-19)
Length = 438
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 154 SEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTE 333
+EEE E+ + + E E E E E + + + E E EE+ E++++ E
Sbjct: 31 AEEEEEEEEEEEEEEEEEEEEEEEEE------EEEDKEEEEEEEEEEEEEEEEEEEEEEE 84
Query: 334 VIRSTKLPIARI 369
V+ TK+ +RI
Sbjct: 85 VLLKTKIWQSRI 96
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 7.5
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 181 DISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQK 327
D+S + EH S LE E+LKF A+ K +L+SE++ EKK K
Sbjct: 1637 DVS-MLEHKVSSLEEENLKFRRVLEEYANEVK---QLHSEKEDLEKKTK 1681
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +1
Query: 157 EEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEV 336
E E E D E SES E+E + E E++ + E EE++ EK ++
Sbjct: 682 ESEGEESEQEDDDKEESESESESEESEEESEEEEESEESDSEESEEEEEEIKEKDIAEQL 741
Query: 337 IRSTKL 354
K+
Sbjct: 742 EEENKI 747
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 193 ITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQKTEVIRSTKL-PIARI 369
+T HS S L +L+ +AT+ + + F+L +EQV + + TE L P ++
Sbjct: 396 LTNHSASELARLYLQAKAMDATKMKDGRRGFDL--DEQVLDVVKTTEKREFLTLDPQEKL 453
Query: 370 KNIMKMDPDVNIVSSDAV 423
K I+ + DV +S+DA+
Sbjct: 454 KVIVALCHDV--LSTDAL 469
>SB_44649| Best HMM Match : Orthopox_F6 (HMM E-Value=4.2)
Length = 111
Score = 27.5 bits (58), Expect = 9.9
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +1
Query: 97 KSLLFTLHRKYKPSSLQNMSEEECHEDVDISDITEHSESYLENE--HLKFALTEATEADN 270
+ +L + K P S+ M E D++ + + S+SY H +E +
Sbjct: 21 EDILTFIEGKILPVSIYEMIEYR-----DLNGVIDESKSYQSRNDLHRNCESSEEEHGKS 75
Query: 271 NKLEFELNSEEQVHEKKQKTE---VIRSTKLPIA 363
N +E+E S+E + ++E +IRS+ + +A
Sbjct: 76 NSVEYESKSDEHESDYDSESEEDGMIRSSDIKLA 109
>SB_14745| Best HMM Match : Histone (HMM E-Value=5.8e-19)
Length = 341
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +1
Query: 448 MFLETIVKETYAFTSSNKRKVISKKDLELVIDK 546
+FLE ++++ +T KRK ++ D+ V+ +
Sbjct: 209 VFLENVIRDAVTYTEHAKRKTVTAMDVVYVLKR 241
>SB_14358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -3
Query: 322 VSSHVLVPQSLVQILVCYYLLL*PPSV--QI*DVHFLDKIPNAL*YLKCRHLRGILLQTY 149
V H+++P + + LVC ++ L P++ + VH IPN + L C H+R I+
Sbjct: 40 VHVHLIIP-NFIAPLVCVHVHLIIPNMITPLVCVHVHLIIPNLIALLVCVHVRLIIPNMI 98
Query: 148 FVTMKVYIY 122
+ M V+++
Sbjct: 99 TLLMCVHVH 107
>SB_14879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +1
Query: 142 LQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLE 282
L ++ +C + + ++ HS +EN HL+F L + A L+
Sbjct: 221 LDDLDVLKCAQKTEECEVLVHSLQMMENPHLRFLLAAVSPAAKAALQ 267
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 SSLQNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFEL-NSEEQVH 312
S + S+EE ++++ + + Y+ +EH K + E T A+ +E L NS E
Sbjct: 1036 SFYDSSSDEENDAPSELNNAPQKLKDYVRSEHFKSSFKE-TRAEKKSMERRLENSSEDFK 1094
Query: 313 EKKQKTEVIRSTKLPI 360
Q+ + + + I
Sbjct: 1095 AMLQRMQKLDKENVQI 1110
>SB_8972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 262 ADNNKLEFELNSEEQVHEKKQKTEVIRSTKLPIARIKNIMKMDPDVNIVSS 414
+ K FE +S+++ + K+ V RSTKL R+ K + VNI S
Sbjct: 14 SSERKKSFEPDSKQRPRDHNYKSTVPRSTKLSYRRMDVHGKDNQPVNIKKS 64
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,340,909
Number of Sequences: 59808
Number of extensions: 265390
Number of successful extensions: 859
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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