Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P06
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    29   0.17 
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        28   0.29 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   3.6  

>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 11/38 (28%), Positives = 27/38 (71%)
 Frame = +2

Query: 71  ILARRYILEKAYYLLYTVNINLHRYKICLKKNATKMST 184
           +L R+Y+L++ Y+L   +N+ +H+ ++ L++ +  +ST
Sbjct: 26  VLQRQYLLQQQYHLQAQLNL-VHQQQLALEQQSAAIST 62


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +1

Query: 445 EMFLETIVKETYAFTSSNKRKVISKKDL 528
           ++FLE ++++  A+T   KRK ++  D+
Sbjct: 60  KVFLENVIRDAVAYTEHAKRKTVTAMDV 87


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 26/134 (19%), Positives = 56/134 (41%)
 Frame = +1

Query: 145 QNMSEEECHEDVDISDITEHSESYLENEHLKFALTEATEADNNKLEFELNSEEQVHEKKQ 324
           + + +EE  +  ++    E  ES L+N   KFA  +A     N  E    + EQ+  +++
Sbjct: 354 EKLVKEEIKQYDELVSAKESKESTLKNSLDKFAKVQANMRATN--ERRKKTLEQIAAEEK 411

Query: 325 KTEVIRSTKLPIARIKNIMKMDPDVNIVSSDAVFLVTKATEMFLETIVKETYAFTSSNKR 504
           +  ++    +P    K I + +  +  ++     +  K T   L T+  ET       ++
Sbjct: 412 R--LLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTAN-LATLKDETKVLLEEKEK 468

Query: 505 KVISKKDLELVIDK 546
                 +L+  +D+
Sbjct: 469 LQTELIELKRAVDE 482


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,043
Number of Sequences: 2352
Number of extensions: 9315
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)