Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P04
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         27   0.47 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    26   1.4  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   4.3  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.6  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +1

Query: 586 QQMVRPM-QSGVKRPRSPSPTYALYAHRL-HQPPMKHQPVYSDHK 714
           QQM++PM Q  + R +   P     + +  H+ P ++ P Y  HK
Sbjct: 290 QQMMKPMLQRHLTRNKRSQPARKRKSSKTDHRHPFQYHPTYDQHK 334


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +1

Query: 568 LNKQHGQQMVRPMQSGVKRPRSP--SPTYALYA-HRLHQPPMKHQPVYSDHKVXDGRMG 735
           +N  H +++  P+   V  PR    +P ++L   H++++P M H   YS+    +  MG
Sbjct: 136 INPYHYKRVESPVLPPVLVPRHSEFAPGHSLLPFHQMNEPNMPHNVNYSNTGFNNSHMG 194


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 661 HRLHQPPMKHQPVYSDH 711
           H  HQP  +HQ  Y  H
Sbjct: 313 HHQHQPQQQHQQQYHSH 329


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 591 DGPTYAIWCETTTESLTYVCIVCTQITP 674
           D P  A++C T T  L  +CI   +  P
Sbjct: 87  DRPMRALFCLTRTNPLRKLCIAIVEWKP 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,117
Number of Sequences: 2352
Number of extensions: 10503
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)