Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P03
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.2  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 122 SAAAGVVLPPSTASKYA 72
           +AAA  +LPP TA+  A
Sbjct: 131 AAAAAALLPPQTAAMAA 147


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 160 DAEKLKKVITE 192
           +AEKLKK ITE
Sbjct: 54  EAEKLKKGITE 64


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 126 NVSGSWRGLATQHS 85
           ++ G+W G A  HS
Sbjct: 215 DLRGNWAGFADSHS 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,128
Number of Sequences: 336
Number of extensions: 909
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)