Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_P02
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-12|CAB07392.5|  424|Caenorhabditis elegans Hypothetical p...    62   4e-10
Z81569-2|CAB04602.4|  424|Caenorhabditis elegans Hypothetical pr...    62   4e-10
U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AF024503-16|AAG24086.2|  287|Caenorhabditis elegans Serpentine r...    30   2.1  
Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine r...    29   4.8  

>Z92834-12|CAB07392.5|  424|Caenorhabditis elegans Hypothetical
           protein K11B4.1 protein.
          Length = 424

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
 Frame = +3

Query: 225 KRTFLSNDYKCNENWNSAISSPLLNKINLNDFYNKLDQTHSS---KGIISAIDVDIFANA 395
           ++  LS+ +   + W+    +  L K+ L   Y  +          G  SA+DVD     
Sbjct: 21  RQPVLSSSFSLEKEWSDRHVA--LGKLGLGGDYEWISAVQKKFIGGGYASAVDVDAAVCV 78

Query: 396 VTEPVXXXXXXXXXXXXXXSAETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLF 575
             +                S +    LES+ +A VR  +K+   + +I +  DP+NYG+F
Sbjct: 79  AEQKDQVDDVIELLYKLRHSVKAAEKLESSEYAIVRLLLKYQ-PETIITLANDPINYGVF 137

Query: 576 LDDYSANILLNELLVKKNYTQAADIAALIMLQEEYNNDILCSLCQYSSYMFIKNYVE 746
           L+ + A I+++  L   N   AA I   ++ QEE +N++L  L  Y    +++  VE
Sbjct: 138 LNQHLACIVIDHFLKTSNIQAAARIVTWMIQQEELDNELLNILGLYVCAKWVELPVE 194


>Z81569-2|CAB04602.4|  424|Caenorhabditis elegans Hypothetical
           protein K11B4.1 protein.
          Length = 424

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
 Frame = +3

Query: 225 KRTFLSNDYKCNENWNSAISSPLLNKINLNDFYNKLDQTHSS---KGIISAIDVDIFANA 395
           ++  LS+ +   + W+    +  L K+ L   Y  +          G  SA+DVD     
Sbjct: 21  RQPVLSSSFSLEKEWSDRHVA--LGKLGLGGDYEWISAVQKKFIGGGYASAVDVDAAVCV 78

Query: 396 VTEPVXXXXXXXXXXXXXXSAETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLF 575
             +                S +    LES+ +A VR  +K+   + +I +  DP+NYG+F
Sbjct: 79  AEQKDQVDDVIELLYKLRHSVKAAEKLESSEYAIVRLLLKYQ-PETIITLANDPINYGVF 137

Query: 576 LDDYSANILLNELLVKKNYTQAADIAALIMLQEEYNNDILCSLCQYSSYMFIKNYVE 746
           L+ + A I+++  L   N   AA I   ++ QEE +N++L  L  Y    +++  VE
Sbjct: 138 LNQHLACIVIDHFLKTSNIQAAARIVTWMIQQEELDNELLNILGLYVCAKWVELPVE 194


>U40799-2|AAA81480.1|  712|Caenorhabditis elegans Hypothetical
           protein F42C5.4 protein.
          Length = 712

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +3

Query: 456 AETGSMLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNEL 614
           ++     ES S   V  S+  +YVDELIQ L   L Y  + DD   + + N++
Sbjct: 296 SDVNKYFESLSRKNV-DSVSREYVDELIQSLSIQLKYLTYHDDCKCDDIWNQM 347


>AF024503-16|AAG24086.2|  287|Caenorhabditis elegans Serpentine
           receptor, class x protein23 protein.
          Length = 287

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -2

Query: 601 NMFAL*SSKNSP*FKGSFNICINSST*SNLILCL---TVACDVDSSMLPV 461
           N+F L +++N     GSF I   +    NL +CL    V C +  S +P+
Sbjct: 22  NLFVLAAARNMSSMNGSFGIITKNHAICNLTMCLLYVLVVCPMQLSNIPI 71


>Z71186-1|CAA94913.1|  301|Caenorhabditis elegans Hypothetical
           protein F23D12.1 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -3

Query: 222 LEKLTKNSLLVLSEHFLTFFNKILSS-CSI--FKYFNEIINRLMCNH 91
           L++  +    +   + LT + K+ +  C I   +YF EI+NR+ CNH
Sbjct: 255 LDEQQQEEFNIFIANVLTSYFKVNTKPCDIEELEYFWEIVNRITCNH 301


>AF022971-13|AAG23979.1|  325|Caenorhabditis elegans Serpentine
           receptor, class h protein247 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = -3

Query: 273 NSNFRYIYNHY*EMSFFLEKLTKNSLLVLSEHFLTFFNKILSSCSIFKYFNEIINRLMCN 94
           N +F+     Y     FL  +T  S L  S  F+     I+    +F Y+N+++N +MC 
Sbjct: 220 NKSFKLSSRSYQLQKNFLIAITLQSFL--SFIFIIVPVNIILYVVVFWYYNQVLNNIMCL 277

Query: 93  HYVFMYLTTKLI 58
            +    L T ++
Sbjct: 278 MFSMFGLETCVV 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,273,792
Number of Sequences: 27780
Number of extensions: 255426
Number of successful extensions: 666
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)