Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_O23
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 46 5e-05
01_07_0304 - 42628086-42628104,42628828-42630263 36 0.028
07_03_1045 + 23528768-23528879,23528979-23530399 35 0.064
01_05_0328 + 21035231-21036931 33 0.20
03_02_0023 + 5065962-5066079,5066179-5067614 33 0.26
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 32 0.60
03_06_0500 - 34361139-34362006,34362295-34362818,34362908-343631... 32 0.60
03_02_0024 + 5079690-5081351 32 0.60
02_04_0370 - 22427559-22427590,22427783-22427964,22428754-224289... 32 0.60
07_03_1046 - 23531218-23532638,23532781-23532868 31 1.4
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 29 3.2
05_06_0098 + 25560158-25560925 29 3.2
03_01_0020 + 180963-181346,181432-181994,183000-183822 29 4.2
10_08_0878 - 21239104-21239968,21242008-21242927 28 7.4
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 28 7.4
04_03_0649 - 18402976-18403220,18403305-18404499 28 7.4
02_05_0303 + 27717097-27717149,27717515-27717635,27717746-277180... 28 9.7
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465... 28 9.7
01_07_0061 + 40818077-40818241,40818494-40818716,40819015-408192... 28 9.7
01_06_1486 - 37709159-37709377,37709558-37709821,37709903-377099... 28 9.7
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 45.6 bits (103), Expect = 5e-05
Identities = 30/119 (25%), Positives = 55/119 (46%)
Frame = +3
Query: 429 TTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTY 608
T S ++ S + W ++ IGG LVD Y G R+ + Y ++ A + +
Sbjct: 132 TPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRV--MAYGVALWSLATFLSPWAAARSL 189
Query: 609 WLMILGRFVFGIGGESLQVVVNNYVVLWFKGKELNMVFGLQLSFSRFGSTVNFXIMEPI 785
WL + R + G+ +NN V+ WF E + G+ ++ + G+T+ ++ PI
Sbjct: 190 WLFLSTRVLLGMAEGVALPSMNNMVLRWFPRTERSSAVGIAMAGFQLGNTIGL-LLSPI 247
>01_07_0304 - 42628086-42628104,42628828-42630263
Length = 484
Score = 36.3 bits (80), Expect = 0.028
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +3
Query: 426 LTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINT 605
+T + +L I + +++ F G D + G RL ++ I F+GA++ G+ +N
Sbjct: 3 ITDVEVEILLGILNLYSLVGSFAAGRTSD-WIGRRLTIILAAVIFFVGAIMM--GLSVN- 58
Query: 606 YWLMILGRFVFGIG 647
Y +++ GRFV GIG
Sbjct: 59 YPMLMAGRFVAGIG 72
>07_03_1045 + 23528768-23528879,23528979-23530399
Length = 510
Score = 35.1 bits (77), Expect = 0.064
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 411 KDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASG 590
K D +++ + +L I + ++I F G D + G R V I F GA F G
Sbjct: 50 KKDFNISDGKVEVLMGILNLYSLIGSFAAGRTSD-WIGRRYTIVFAAVIFFAGA--FLMG 106
Query: 591 VYINTYWLMILGRFVFGIG-GESLQV 665
+N Y +++ GRFV GIG G +L +
Sbjct: 107 FAVN-YAMLMFGRFVAGIGVGYALMI 131
>01_05_0328 + 21035231-21036931
Length = 566
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +3
Query: 396 LVDNFKDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAV 575
LV HL ++ + + + + +LC +GG+L D + G L ++ + IG
Sbjct: 45 LVTYLTGTMHLPSAAAANVVTDFMGTSFLLCLLGGFLADSFLGRYLTIAVFALVQSIGTA 104
Query: 576 IFASGVYI 599
+ A+ +
Sbjct: 105 LLAASTLV 112
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 411 KDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASG 590
K+D +T +Q +L + + ++ G D + G R V+ I F GA++ G
Sbjct: 52 KEDLKITDTQIEILAGVINIYSLFGSLAAGMTSD-WLGRRYTMVLAAAIFFTGALLM--G 108
Query: 591 VYINTYWLMILGRFVFGIG-GESLQV 665
+ N Y ++ GRFV GIG G +L +
Sbjct: 109 LAPN-YAFLMAGRFVAGIGVGYALMI 133
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Frame = +3
Query: 429 TTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTY 608
++S ++ S + W V +GG L DRY G + V+ F + +
Sbjct: 157 SSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKK---VMAGAAALWSLATFLTPWAASQS 213
Query: 609 WLMILG-RFVFGIGGESLQVVVNNYVVLWFKGKELNMVFGLQLSFSRFGSTVNF 767
+M+L R +FG+ ++ ++ WF E G+ + G+ ++F
Sbjct: 214 TIMLLAIRALFGLAEGVAFPTMSTFLPKWFPTHERATAVGISMGGFHLGNVISF 267
>03_06_0500 -
34361139-34362006,34362295-34362818,34362908-34363125,
34363259-34363406
Length = 585
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 468 WPNV--ILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVI 578
W +V ++ +GG+L D Y G R TV++ T++++ +I
Sbjct: 88 WTSVTTLMPLVGGFLADGYLG-RFSTVLFSTLIYLSGLI 125
>03_02_0024 + 5079690-5081351
Length = 553
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 411 KDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASG 590
K D +++ ++ +L I + +++ G D + G R V+ I F GA+I
Sbjct: 86 KKDLNISDAKVEVLAGIINIYSLVGSLAAGRTSD-WIGRRYTMVLASVIFFAGALIMGLA 144
Query: 591 VYINTYWLMILGRFVFGIG-GESLQV 665
+Y +++LGRFV G+G G +L +
Sbjct: 145 P---SYAIVMLGRFVAGVGVGYALMI 167
>02_04_0370 -
22427559-22427590,22427783-22427964,22428754-22428939,
22429125-22429280,22429366-22429589,22430933-22430968,
22431390-22431539
Length = 321
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 419 HTFDNFPVYFALFYIFMAQCYIM-LYWWILS*QIFWCKIRNSNIHD 553
H FD P+Y+ +F + ++ +YWW+L ++ +I+ N+ D
Sbjct: 263 HNFDG-PIYYYVFNSLLFSLLVLHIYWWVLIYRMLVRQIKTRNVGD 307
>07_03_1046 - 23531218-23532638,23532781-23532868
Length = 502
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 411 KDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFASG 590
K D +T Q +L I + +++ F G D + G R T+VF A FA
Sbjct: 42 KKDLKITDVQVEILMGILNIYSLVGSFAAGRTAD-WIGRRF------TVVFAAAFFFARA 94
Query: 591 V---YINTYWLMILGRFVFGIG 647
+ + Y +++GRFV G+G
Sbjct: 95 LLMGFSGDYATLMVGRFVAGVG 116
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +3
Query: 447 LLYSIYSWPNVILCFIGGYLVDRYFG-VRLG-TVIYMTIVFIGAVIFASGVYINTYWLMI 620
L+ S + W ++ +GG DR+ G V LG V++ + I V+ I +L++
Sbjct: 222 LIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWS---IATVLTPLAAKIGLPFLLV 278
Query: 621 LGRFVFGIGGESLQVVVNNYVVLWFKGKELNMVFGLQLSFSRFGS 755
+ F+ GIG +NN + W E + L S GS
Sbjct: 279 MRAFM-GIGEGVAMPAMNNILSKWVPVSERSRSLALVYSGMYLGS 322
>05_06_0098 + 25560158-25560925
Length = 255
Score = 29.5 bits (63), Expect = 3.2
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = -3
Query: 751 PNLENDNCSPNTMF---SSFPLNHRXXXXXXXTCNDS--PPIPNTNLPSIISQYVFI*TP 587
P+ + SP++ SS P +HR + + PP P T +P I F T
Sbjct: 8 PSSSTSSSSPSSAAAAASSSPSSHRPPPPPPSSSSQPALPPSPRTVVPRTIDTTPFPTTF 67
Query: 586 LANMTAPIKTMVMYITVPNLTPKYLSTKYPPIKHN 482
+ TA K +V +T + TP ++ PP K N
Sbjct: 68 VQADTASFKQVVQMLTGSDTTP---PSQRPPAKSN 99
>03_01_0020 + 180963-181346,181432-181994,183000-183822
Length = 589
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 396 LVDNFKDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAV 575
LV HL ++ + + + +LC +GG+L D Y G L I+ + G
Sbjct: 72 LVTYLTGTMHLGSAASANAVTNFLGTSFMLCLLGGFLADTYLGRYLTIAIFTAVQAAGMA 131
Query: 576 I 578
+
Sbjct: 132 V 132
>10_08_0878 - 21239104-21239968,21242008-21242927
Length = 594
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 480 ILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVI 578
+LC +GG++ D Y G L I+ + G +I
Sbjct: 84 MLCLLGGFVADTYLGRYLTIAIFEAVQATGVMI 116
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 456 SIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVI 578
SI+ + IG +L D Y+G TVI + I+ IG +I
Sbjct: 90 SIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLI 130
>04_03_0649 - 18402976-18403220,18403305-18404499
Length = 479
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 258 SGSSRTPQISPTSWRHPANRIHRFIALLLMCFLCF 362
S SS T S SWR R+H LLL+ +C+
Sbjct: 443 SSSSTTSSFSRLSWRMLDVRLHLGALLLLLLLVCY 477
>02_05_0303 +
27717097-27717149,27717515-27717635,27717746-27718057,
27718172-27718276,27718367-27718821,27718964-27719094,
27719215-27719268,27719378-27719747,27719848-27719981,
27720081-27720319
Length = 657
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +3
Query: 555 IVFIGAVIFASGVYINTYWLMILGRFVFGIGGESLQVVVNNYV 683
++F+G +++A +N+ ++I+GR + G+G S + V Y+
Sbjct: 321 MLFLGNLLYALAYDVNSLTVLIVGRLLCGLG--SARAVNRRYI 361
>02_01_0622 -
4658133-4658150,4658269-4658337,4658436-4658462,
4658808-4658873,4658954-4659076,4659562-4659629,
4659703-4659766,4659994-4660135,4660218-4660306,
4660574-4660637,4660870-4661021,4661124-4661261,
4661742-4661867,4661971-4662183,4662343-4662426,
4662583-4662742,4662993-4663126,4664047-4664136,
4664313-4664471,4665528-4665611,4666170-4666289,
4666338-4666391,4666899-4666945,4667556-4667598,
4667730-4668586,4668845-4668899
Length = 1081
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 501 YLVDRYFGVRLGTVIYMTIVFIGAVIFASGVYINTYWLMILGRFVFGIGGESLQVVVNN 677
+L + Y G + + + +GA++FA GV +W GR V+ +GGE VV NN
Sbjct: 291 FLKEAYPGHYVQLAVLGVLGVLGALVFAGGV--GEFW----GRDVW-VGGEVFIVVPNN 342
>01_07_0061 +
40818077-40818241,40818494-40818716,40819015-40819263,
40819455-40819505,40819611-40819871,40819994-40820046,
40820234-40820348,40820475-40820696,40821280-40822253
Length = 770
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +3
Query: 408 FKDDTHLTTSQFTLLYSIYSWPNVILCFIGGYLVDRYFGVRLGTVIYMTIVFIGAVIFAS 587
F D H + +S+ P+V+L +IG R + + Y +I + A I AS
Sbjct: 322 FADLGHFNVRAIQIGFSVVLLPSVLLAYIGQAAYLRIYPEHVADTFYKSIP-VAAAIIAS 380
Query: 588 GVYINTYWLMILGRFVFG 641
I+ + +I + G
Sbjct: 381 QAMISGAFAIIAQSQILG 398
>01_06_1486 -
37709159-37709377,37709558-37709821,37709903-37709995,
37710387-37710581,37710665-37710763,37710884-37711132,
37711264-37711467,37711543-37711602,37711731-37711913,
37712382-37712999,37713101-37713169,37713275-37713853
Length = 943
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 319 ILFAGWRHDVGDICGVLLLPLASG 248
ILF GWR D+ D+ VL LA G
Sbjct: 673 ILFCGWRRDIHDMIMVLEAFLAPG 696
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,119,205
Number of Sequences: 37544
Number of extensions: 379786
Number of successful extensions: 861
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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