Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O21
         (791 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0363 - 28745581-28745709,28746043-28746114,28746373-287464...    87   2e-17
01_06_0411 + 29151647-29151790,29152974-29153039,29153398-291535...    86   3e-17
04_04_1432 - 33558895-33559023,33559215-33559286,33559405-335594...    66   2e-11
05_06_0265 - 26759960-26760088,26760315-26760386,26760457-267605...    40   0.002
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515...    38   0.009
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691...    31   1.0  

>01_06_0363 -
           28745581-28745709,28746043-28746114,28746373-28746417,
           28746523-28746618,28747029-28747080,28747232-28747305,
           28747386-28747502,28747844-28747930,28748186-28748281,
           28748508-28748654
          Length = 304

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 40/87 (45%), Positives = 55/87 (63%)
 Frame = +1

Query: 442 KFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFRTNPN 621
           + QAY +VLDDIMD S  RRG PCW+R P+VG+  A ND L++ S +    +  FR    
Sbjct: 81  QLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGL-IAINDGLVLRSQISRIFRRYFRGKSY 139

Query: 622 YMKMFELFNETLWRTSMGQHLDHVTGN 702
           Y+ + +LFNE   +T+ GQ LD +T N
Sbjct: 140 YVDLLDLFNEVEIQTTSGQLLDQITTN 166


>01_06_0411 +
           29151647-29151790,29152974-29153039,29153398-29153538,
           29153638-29153724,29153968-29154084,29154177-29154265,
           29154510-29154561,29154667-29154762,29154835-29154879,
           29155002-29155091,29155164-29155235,29155490-29155618
          Length = 375

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = +1

Query: 394 NKSKLSEVPQIGDWLKKFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIH 573
           NK +      +G  ++  QAY +VLDDIMD S  RRG PCW+R P+VG+  A ND +++ 
Sbjct: 101 NKEETFLACTLGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWFRVPQVGL-IAVNDGIILR 159

Query: 574 SSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNR-KTDYSSFTL 732
           + +   L+ +F+    Y+ + +LFNE  ++T+ GQ LD +T +  + D + + L
Sbjct: 160 NHISRILQRHFKGKLYYVDLIDLFNEVEFKTASGQLLDLITTHEGEKDLTKYNL 213


>04_04_1432 -
           33558895-33559023,33559215-33559286,33559405-33559494,
           33559574-33559618,33559693-33559788,33559905-33559956,
           33560044-33560132,33560226-33560342,33560448-33560534,
           33560646-33560761,33560854-33560878,33561816-33562121
          Length = 407

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = +1

Query: 430 DWLKKFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSLFEFLKTNFR 609
           +WL   QA  +VLDDI D +  RR   CWY+ P VG++ A ND +L+   +   +K  F+
Sbjct: 148 EWL---QASALVLDDITDNAYTRRDNLCWYKLPTVGMS-AINDGVLLKCHVQAIIKRYFK 203

Query: 610 TNPNYMKMFELFNETLWRTSMGQHLDHVT 696
               ++ + EL+NE   +T+MGQ LD +T
Sbjct: 204 EKFYFLDLMELWNEIGLQTAMGQMLDLIT 232


>05_06_0265 -
           26759960-26760088,26760315-26760386,26760457-26760546,
           26760649-26760693,26760785-26760880,26760980-26761031,
           26761209-26761297,26761388-26761504,26761680-26761737,
           26761834-26761936,26762027-26762051,26762677-26762826
          Length = 341

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/50 (34%), Positives = 30/50 (60%)
 Frame = +1

Query: 547 AFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVT 696
           A ND +++ + +   L+ +FR    Y  + +LFNE  ++T+ GQ LD +T
Sbjct: 117 AINDGIILRNHITRMLRLHFRGKLYYADLLDLFNEVEFKTASGQLLDLIT 166


>04_04_1431 -
           33551127-33551300,33551362-33551433,33551508-33551597,
           33551671-33551715,33551785-33551880,33552245-33552296,
           33552412-33552500,33552590-33552887,33553007-33553109,
           33553328-33553352,33553503-33553763
          Length = 434

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 17/62 (27%), Positives = 35/62 (56%)
 Frame = +1

Query: 529 EVGITCAFNDSLLIHSSLFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRK 708
           +VG+    ND +++   +   +K  FR  P ++ + E+++E   +TS+GQ LD ++ +  
Sbjct: 190 QVGLR-GINDGIILKCHILIMIKKYFREKPYFLDILEIWSEIALQTSLGQMLDLISTHTG 248

Query: 709 TD 714
            D
Sbjct: 249 AD 250


>10_08_1052 -
           22567937-22568329,22568436-22568669,22568787-22569111,
           22569239-22569484,22569576-22569916,22570070-22570150,
           22570275-22570394,22570549-22570650,22570900-22571035,
           22571210-22571362,22572605-22572906
          Length = 810

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 350 FFSLIISRFFEAVVIFALLFLYLI 279
           FFSL I +F  ++ +FAL+F Y+I
Sbjct: 362 FFSLSIRKFLISIAVFALVFFYMI 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,876,842
Number of Sequences: 37544
Number of extensions: 407595
Number of successful extensions: 995
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)