Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O21
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical pr...    71   1e-12
Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine re...    29   3.8  
AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical ...    29   5.0  
AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine r...    29   5.0  
AF077533-2|AAP40529.1|  972|Caenorhabditis elegans Hypothetical ...    28   8.8  
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ...    28   8.8  

>Z81106-1|CAB03221.2|  352|Caenorhabditis elegans Hypothetical
           protein R06C1.2 protein.
          Length = 352

 Score = 70.9 bits (166), Expect = 1e-12
 Identities = 39/112 (34%), Positives = 65/112 (58%)
 Frame = +1

Query: 403 KLSEVPQIGDWLKKFQAYCIVLDDIMDGSSVRRGMPCWYRRPEVGITCAFNDSLLIHSSL 582
           +L  V +    L+  Q++ ++ DDIMD S  RRG PCW+RR  VG++ A ND+ ++ S +
Sbjct: 77  ELQAVCEAAATLEIIQSFYLIADDIMDNSETRRGKPCWFRREGVGMS-AINDAFIMDSFV 135

Query: 583 FEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDR 738
            + L+     + N  ++ E + ++  +T +GQ LD  + N+    SSFT DR
Sbjct: 136 EDILRLALPGHVNLDRLCEAYRKSKQKTLIGQFLDTSSVNQ---ISSFTWDR 184


>Z70753-8|CAA94763.1|  137|Caenorhabditis elegans Hypothetical
           protein F40F9.8 protein.
          Length = 137

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 340 NEKKMFDDLLPEVIMTLQNKSKLSEVPQ 423
           N +  FDDLLP V++ +QN+    + P+
Sbjct: 42  NGRVSFDDLLPRVVLAIQNEEWKDDTPK 69


>AF025459-7|AAB70981.1|  132|Caenorhabditis elegans Hypothetical
           protein H14A12.5 protein.
          Length = 132

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +1

Query: 208 IVDMSVFNCLKFTRKVTYKYWPQLIRYKNNSANMTTAS-KNLEIINEKKMFDDLLPE 375
           +VD+  FN  +F+ K+T +YW ++ R +N+S +    +   L+  N   + D+ LP+
Sbjct: 12  MVDLQTFNT-QFS-KITDRYWREIFRRQNDSHHPDHINVSRLQTANIITVLDENLPQ 66


>AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine
           receptor, class z protein67 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = -1

Query: 401 DLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLFLYLISCGQYLYVTLRVNLRQLNT 222
           D+ C V+        +  + LI S FF  + IF  + + L+     LY+ + +++R+L+ 
Sbjct: 157 DIICIVLHAVTFFDDSHPYYLIWSVFF--ITIFYTMHI-LLFLSALLYIPILISIRKLSH 213

Query: 221 LMSTMS*SPMR---W*NHIRFYFQQFS 150
           L S+   +P R   W   I F F+  S
Sbjct: 214 LASSQLNNPQRYIFWQTMILFVFKSMS 240


>AL132952-5|CAB61137.1|  498|Caenorhabditis elegans Hypothetical
           protein Y51H4A.5 protein.
          Length = 498

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 407 NLDLFCSVIITSGRRSSNIFFSLIISRFFEAVVIFALLF 291
           NL+LF +   T   RS+ IFF+   +  F  +++F L+F
Sbjct: 141 NLELFFACFNTCIFRSNRIFFNSAANLNFATILVFFLIF 179


>AF067613-11|AAN73862.2|  334|Caenorhabditis elegans Serpentine
           receptor, class z protein19 protein.
          Length = 334

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 317 AVVIFALLFLYLISCGQYLYVTLRVNLRQLNTLMSTMS*SPMRW 186
           AVVI  +L   LI    +LY+ + +++R+L  L S    +P R+
Sbjct: 196 AVVINQILLHILIFVSGFLYIPIIISVRKLAHLASAQQNNPQRY 239


>AF077533-2|AAP40529.1|  972|Caenorhabditis elegans Hypothetical
           protein F54G2.1b protein.
          Length = 972

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 322 KNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKF 447
           KNL I+ +KK  + L  E + T+ +K    +V +  + L K+
Sbjct: 46  KNLSIVGDKKQIEALYVEALYTITHKLGQGDVEESQESLYKY 87


>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
           protein F54G2.1a protein.
          Length = 1126

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 322 KNLEIINEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKF 447
           KNL I+ +KK  + L  E + T+ +K    +V +  + L K+
Sbjct: 30  KNLSIVGDKKQIEALYVEALYTITHKLGQGDVEESQESLYKY 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,762,398
Number of Sequences: 27780
Number of extensions: 381684
Number of successful extensions: 1006
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)