Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O21
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   4.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   4.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   4.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.3  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    22   7.5  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    22   7.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 3   GVFLFCSIDIFLLXVDKPQC 62
           GVF+ C +  FL+ V  P C
Sbjct: 334 GVFVVCWLPFFLMYVIVPFC 353


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 3   GVFLFCSIDIFLLXVDKPQC 62
           GVF+ C +  FL+ V  P C
Sbjct: 334 GVFVVCWLPFFLMYVIVPFC 353


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 3   GVFLFCSIDIFLLXVDKPQC 62
           GVF+ C +  FL+ V  P C
Sbjct: 334 GVFVVCWLPFFLMYVIVPFC 353


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 596 FRNSNKELCIKRESLKAHVMPTSG 525
           FR+ +KELC  +  L   + PT G
Sbjct: 485 FRDMHKELCDGKPGLCDAMKPTKG 508


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 580 LFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDR 738
           LF FL+T  +  P Y     +  E+L     G+H   +     + Y+  TL+R
Sbjct: 25  LFSFLRTRTKLQPTYFHHTYIIYESL----CGRHEKRLLNELLSSYN--TLER 71


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +1

Query: 580 LFEFLKTNFRTNPNYMKMFELFNETLWRTSMGQHLDHVTGNRKTDYSSFTLDR 738
           LF FL+T  +  P Y     +  E+L     G+H   +     + Y+  TL+R
Sbjct: 25  LFSFLRTRTKLQPTYFHHTYIIYESL----CGRHEKRLLNELLSSYN--TLER 71


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 226 IHSCLLCHEVQCAGRTIYVSIFNSSVHVAIHTAED 122
           ++ C LCHE   + +T+ + I   S    + +  D
Sbjct: 259 VYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPRD 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,102
Number of Sequences: 438
Number of extensions: 4661
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)