SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O20
         (834 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a pr...    87   7e-17
U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a pr...    87   7e-17
L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens (c...    87   7e-17
BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a ...    87   7e-17
BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a ...    87   7e-17
AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A ...    87   7e-17
U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a pr...    85   3e-16
BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.    83   2e-15
BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.    83   2e-15
BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.    83   2e-15
AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.              83   2e-15
AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L...    73   1e-12
BC105600-1|AAI05601.1|  121|Homo sapiens MGC70863 protein protein.     58   4e-08
BC065556-1|AAH65556.1|  121|Homo sapiens similar to RPL23AP7 pro...    58   5e-08
AL844851-8|CAM25789.1|  123|Homo sapiens major histocompatibilit...    51   6e-06
AL844851-6|CAI18575.2|  442|Homo sapiens major histocompatibilit...    51   6e-06
AL669813-9|CAM24949.1|  123|Homo sapiens major histocompatibilit...    51   6e-06
AL669813-7|CAI17628.1|  442|Homo sapiens major histocompatibilit...    51   6e-06
AL645939-8|CAM25440.1|  123|Homo sapiens major histocompatibilit...    51   6e-06
AL645939-6|CAI18086.2|  442|Homo sapiens major histocompatibilit...    51   6e-06
AL022723-13|CAI20359.1|  442|Homo sapiens major histocompatibili...    51   6e-06
BX005428-8|CAM26185.1|  123|Homo sapiens major histocompatibilit...    47   7e-05
BX005428-6|CAM26183.1|  442|Homo sapiens major histocompatibilit...    47   7e-05
BC009260-1|AAH09260.2|  460|Homo sapiens HLA-F protein protein.        47   7e-05
AK125274-1|BAC86108.1|  349|Homo sapiens protein ( Homo sapiens ...    43   0.002
AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.           32   2.2  
AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated prot...    32   2.2  
BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated prot...    31   3.9  
BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated prot...    31   3.9  
AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated prot...    31   3.9  
X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.    31   5.1  
BC130317-1|AAI30318.1|   49|Homo sapiens metallothionein 1D (pse...    31   5.1  
BC130315-1|AAI30316.1|   49|Homo sapiens metallothionein 1D (pse...    31   5.1  
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     31   5.1  
BC020757-1|AAH20757.1|   62|Homo sapiens MT1G protein protein.         31   5.1  
AF348999-1|AAO32959.2|   49|Homo sapiens MTM protein.                  31   5.1  
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    31   5.1  
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    31   5.1  
BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated prot...    31   6.8  
BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated prot...    31   6.8  
BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated prot...    31   6.8  
AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated prot...    31   6.8  
X97261-1|CAA65916.1|   61|Homo sapiens Metallothionein 1R protein.     30   9.0  
BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated prot...    30   9.0  
AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated prot...    30   9.0  

>U43701-1|AAB03210.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>U02032-1|AAA03341.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>L13799-1|AAA35681.1|  147|Homo sapiens protein ( Homo sapiens
           (clone 01) liver expressed protein mRNA, 3'end. ).
          Length = 147

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 11  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70

Query: 820 PLTXE 834
           PLT E
Sbjct: 71  PLTTE 75


>BC058041-1|AAH58041.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>BC014459-1|AAH14459.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>AF001689-1|AAC51934.1|  156|Homo sapiens ribosomal protein L23A
           protein.
          Length = 156

 Score = 87.0 bits (206), Expect = 7e-17
 Identities = 40/65 (61%), Positives = 48/65 (73%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y IIKF
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>U37230-1|AAB17510.1|  156|Homo sapiens ribosomal protein L23a
           protein.
          Length = 156

 Score = 85.0 bits (201), Expect = 3e-16
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG H  + +KIR S  FRRPKT    R PKYPRKS P+RN++D Y II F
Sbjct: 20  KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>BC098172-1|AAH98172.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 82.6 bits (195), Expect = 2e-15
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG HG + +KIR S  F+RPKT    R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>BC096740-1|AAH96740.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 82.6 bits (195), Expect = 2e-15
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG HG + +KIR S  F+RPKT    R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>BC096706-1|AAH96706.1|  130|Homo sapiens RPL23AP13 protein protein.
          Length = 130

 Score = 82.6 bits (195), Expect = 2e-15
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG HG + +KIR S  F+RPKT    R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>AC092839-2|AAX93105.1|  130|Homo sapiens unknown protein.
          Length = 130

 Score = 82.6 bits (195), Expect = 2e-15
 Identities = 38/65 (58%), Positives = 49/65 (75%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++ V+KG HG + +KIR S  F+RPKT    R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20  KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>AE006463-8|AAK61228.1|  156|Homo sapiens 60S ribosomal protein L23A
           like protein.
          Length = 156

 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 33/65 (50%), Positives = 44/65 (67%)
 Frame = +1

Query: 640 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 819
           KALKA++  +KG H    +K R S+ F+RPKT    R P+YP KS P+RN++  Y +IKF
Sbjct: 20  KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79

Query: 820 PLTXE 834
           PLT E
Sbjct: 80  PLTTE 84


>BC105600-1|AAI05601.1|  121|Homo sapiens MGC70863 protein protein.
          Length = 121

 Score = 58.0 bits (134), Expect = 4e-08
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +1

Query: 709 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTXE 834
           S+ FRRPKT    R P+YP+KS P+RN++  Y IIKFPLT E
Sbjct: 2   SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTE 43


>BC065556-1|AAH65556.1|  121|Homo sapiens similar to RPL23AP7
           protein protein.
          Length = 121

 Score = 57.6 bits (133), Expect = 5e-08
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = +1

Query: 709 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTXE 834
           S+ FRRPKT    R P+YPRKS P+RN++  Y IIKFPL  E
Sbjct: 2   SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATE 43


>AL844851-8|CAM25789.1|  123|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 123

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 29  SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 88

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 89  ALQSLRFGF 97


>AL844851-6|CAI18575.2|  442|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 442

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 348 SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 407

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 408 ALQSLRFGF 416


>AL669813-9|CAM24949.1|  123|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 123

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 29  SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 88

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 89  ALQSLRFGF 97


>AL669813-7|CAI17628.1|  442|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 442

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 348 SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 407

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 408 ALQSLRFGF 416


>AL645939-8|CAM25440.1|  123|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 123

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 29  SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 88

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 89  ALQSLRFGF 97


>AL645939-6|CAI18086.2|  442|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 442

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 348 SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 407

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 408 ALQSLRFGF 416


>AL022723-13|CAI20359.1|  442|Homo sapiens major histocompatibility
           complex, class I, F protein.
          Length = 442

 Score = 50.8 bits (116), Expect = 6e-06
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 348 SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 407

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 408 ALQSLRFGF 416


>BX005428-8|CAM26185.1|  123|Homo sapiens major histocompatibility
           complex class I F protein.
          Length = 123

 Score = 47.2 bits (107), Expect = 7e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V G LM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 29  SVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 88

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 89  ALQSLRFGF 97


>BX005428-6|CAM26183.1|  442|Homo sapiens major histocompatibility
           complex class I F protein.
          Length = 442

 Score = 47.2 bits (107), Expect = 7e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V G LM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 348 SVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 407

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 408 ALQSLRFGF 416


>BC009260-1|AAH09260.2|  460|Homo sapiens HLA-F protein protein.
          Length = 460

 Score = 47.2 bits (107), Expect = 7e-05
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTFL* 654
           S V G LM+   S  FLLG  F GYLGCL   +VLG RK  ++ I   L+  + F T   
Sbjct: 366 SVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTAFL 425

Query: 653 ALSALVTGF 627
           AL +L  GF
Sbjct: 426 ALQSLRFGF 434


>AK125274-1|BAC86108.1|  349|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43284 fis, clone LYMPB2000083, highly  similar
           to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
           PRECURSOR. ).
          Length = 349

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 24/45 (53%), Positives = 27/45 (60%)
 Frame = -2

Query: 833 SXVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 699
           S V GNLM+   S  FLLG  F GYLGCL   +VLG RK   L +
Sbjct: 262 SVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306


>AK122706-1|BAC85504.1|  814|Homo sapiens  ISOFORM.  protein.
          Length = 814

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +3

Query: 162 QNTGTCPESSCACPEISC---ACPETSCACPES 251
           Q  G C   SC   E+SC    CP T CA P S
Sbjct: 384 QERGLCVRCSCQAGEVSCEEQECPVTPCALPAS 416


>AB126079-1|BAD20206.1|  202|Homo sapiens keratin associated protein
           protein.
          Length = 202

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +3

Query: 153 CVSQNTGTCPESSCACPEISCACPETSC--ACPESSC 257
           C S   G+C +SSC  P   C C  + C   C +SSC
Sbjct: 149 CCSSGCGSCCQSSCCNP---CCCQSSCCVPVCCQSSC 182


>BC069297-1|AAH69297.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 257
           TC +Q    C E  C C    C C  + C C  S C
Sbjct: 10  TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43


>BC069078-1|AAH69078.1|  105|Homo sapiens keratin associated protein
           17-1 protein.
          Length = 105

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 257
           TC +Q    C E  C C    C C  + C C  S C
Sbjct: 10  TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43


>AJ406952-1|CAC27591.1|  105|Homo sapiens keratin associated protein
           16.1 protein.
          Length = 105

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISCACPETSCACPESSC 257
           TC +Q    C E  C C    C C  + C C  S C
Sbjct: 10  TCCTQEQNCCEE--CCCQPGCCGCCGSCCGCGGSGC 43


>X63338-1|CAA44938.1|  175|Homo sapiens high sulfur keratin protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 132 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           FC  Y +C    +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50


>BC130317-1|AAI30318.1|   49|Homo sapiens metallothionein 1D
           (pseudogene) protein.
          Length = 49

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 257
           +C +  + TC  SSC C E  C +C +  C+C    C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41


>BC130315-1|AAI30316.1|   49|Homo sapiens metallothionein 1D
           (pseudogene) protein.
          Length = 49

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 257
           +C +  + TC  SSC C E  C +C +  C+C    C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 132 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           FC  Y +C    +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50


>BC020757-1|AAH20757.1|   62|Homo sapiens MT1G protein protein.
          Length = 62

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 180 PESSCACPEISCACPETSCACPESSC 257
           P  SCA   +SC C  +SC C E  C
Sbjct: 3   PNCSCAAAGVSCTC-ASSCKCKECKC 27


>AF348999-1|AAO32959.2|   49|Homo sapiens MTM protein.
          Length = 49

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 150 TCVSQNTGTCPESSCACPEISC-ACPETSCACPESSC 257
           +C +  + TC  SSC C E  C +C +  C+C    C
Sbjct: 6   SCATGGSCTCA-SSCKCKEYKCTSCKKNCCSCCPMGC 41


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 132 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           FC  Y +C    +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +3

Query: 132 FCKLY*TCVSQNTGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           FC  Y +C    +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 8   FCG-YPSC--STSGTCGSSCCQPSCCETSCCQPSCCETSC-CQPSCC 50


>BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 168 TGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86


>BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 168 TGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86


>BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 168 TGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86


>AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +3

Query: 168 TGTCPESSC--ACPEISC---ACPETSCACPESSC 257
           +GTC  S C  +C E SC   +C ETSC C  S C
Sbjct: 53  SGTCSSSCCQPSCCETSCCQPSCCETSC-CQPSCC 86


>X97261-1|CAA65916.1|   61|Homo sapiens Metallothionein 1R protein.
          Length = 61

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 153 CVSQNTGTCP-ESSCACPEISC-ACPETSCACPESSC 257
           C     G+C   SSC C E  C +C ++ C+C    C
Sbjct: 5   CSCATGGSCSCASSCKCKECKCTSCKKSCCSCCPMGC 41


>BC131611-1|AAI31612.1|  298|Homo sapiens keratin associated protein
           10-11 protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 156 VSQNTGTCPESSCACPEISCACPETSCACPESSCL 260
           V ++T   P SSC  P  SC   ++SC CP +SC+
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP-ASCV 274


>AB076359-1|BAD01546.1|  298|Homo sapiens keratin associated protein
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 156 VSQNTGTCPESSCACPEISCACPETSCACPESSCL 260
           V ++T   P SSC  P  SC   ++SC CP +SC+
Sbjct: 244 VCRSTCCVPVSSCCAPTSSC---QSSCCCP-ASCV 274


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.133    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,078,427
Number of Sequences: 237096
Number of extensions: 1169818
Number of successful extensions: 4108
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3988
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -