Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O18
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0125 - 12531409-12531442,12531577-12531668,12531747-125323...    31   0.91 
07_03_1299 + 25598869-25600006,25600718-25600773                       29   6.4  
12_01_0485 - 3848721-3849227,3852019-3852369                           28   8.5  
08_01_0106 - 762287-763393,763752-764414                               28   8.5  

>09_03_0125 -
           12531409-12531442,12531577-12531668,12531747-12532337,
           12532454-12532789,12532899-12533156,12533867-12533971,
           12534625-12534702,12535464-12535542,12535649-12535723,
           12535828-12535946,12536042-12537106
          Length = 943

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 555 NPNAPRRRITTKSLFITPLVCPKGQRLDGNGCVQTVTVNKDEHERI-LLXELNAQFKPTL 731
           N  +PR  +  ++  +   V    Q +D  GC+  V  +   +  +  + E+N  +K  L
Sbjct: 457 NCGSPRAELNLETFKLRSSVSGTLQLVDATGCIDVVIPDLPPNVCMDSIYEIN-DYKVVL 515

Query: 732 SGDVTYYDNYDENEP 776
            G + Y D YD  +P
Sbjct: 516 EGPMAYLDPYDVTDP 530


>07_03_1299 + 25598869-25600006,25600718-25600773
          Length = 397

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -3

Query: 575 PPRRIWVTAFRTLKPRFPCEFSGEAVEGTRWR 480
           PP+R      R L+PR+  E +G+++EG R R
Sbjct: 214 PPQRQHRRIIRRLRPRYLPELTGDSLEGYRRR 245


>12_01_0485 - 3848721-3849227,3852019-3852369
          Length = 285

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 498 DRLAAELAWKSWLQSPESGNPNAPRRRITTKSLFITPLVCPKGQRLDGNGCVQ 656
           DR     AWKSWL+   +    AP   +     ++ P   P   RL     VQ
Sbjct: 127 DRTVLTNAWKSWLEEHITATGKAPPGNVAGNHTWVGPPQRPPDLRLTPGRHVQ 179


>08_01_0106 - 762287-763393,763752-764414
          Length = 589

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 738 DVTYYDNYDENEPGP 782
           DVTYY +YD+ EP P
Sbjct: 446 DVTYYRSYDDGEPRP 460


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,448,768
Number of Sequences: 37544
Number of extensions: 413764
Number of successful extensions: 1164
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)