BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_O18
(874 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 25 2.3
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 25 4.0
AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein. 23 9.2
AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein. 23 9.2
AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein. 23 9.2
AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein. 23 9.2
AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein. 23 9.2
AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein. 23 9.2
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.4 bits (53), Expect = 2.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 771 EPGPLQLSIPIGLDPLAAPLQ 833
+P P Q +G DPL++PLQ
Sbjct: 178 QPAPTQPHELVGTDPLSSPLQ 198
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.6 bits (51), Expect = 4.0
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 340 SPQPSRCLRCGTRGRRYYWCRA 405
+P+ RC RC RG + CR+
Sbjct: 471 APERQRCYRCLERGHLAHACRS 492
>AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
>AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
>AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
>AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
>AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
>AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 596 QRFCSYSPPRRIWVTAFRTLKPRF 525
+ F S PP ++V L+PRF
Sbjct: 111 EEFPSCRPPAAVFVAQLNALQPRF 134
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,613
Number of Sequences: 2352
Number of extensions: 14344
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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