Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O18
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z81481-2|CAB03948.1|  593|Caenorhabditis elegans Hypothetical
           protein C38D9.2 protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 351 RLRGVVLRWSHYSAPPPLSSGPARKQTAVLKINQSPPMCG 232
           R   V  +W+HY  PPP  +     +T + +   +   CG
Sbjct: 447 RSENVAPQWNHYPQPPPKEAPKEAIETTIKRTESTCTFCG 486


>U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical
           protein F25B4.5 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
 Frame = +1

Query: 619 RKDKDWMETVAFRR*L----LIKMNTNASCXR 702
           + D+ W+E + F R +    L K NTNASC R
Sbjct: 204 QSDRLWLEAIGFERAVYMDELCKGNTNASCKR 235


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,062
Number of Sequences: 27780
Number of extensions: 329376
Number of successful extensions: 759
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)