Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O14
         (358 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC; ...    75   5e-13
UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c oxi...    60   1e-08
UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;...    58   6e-08
UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p...    57   1e-07
UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C, mitoch...    48   4e-05
UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella ve...    33   1.5  
UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1; ...    31   5.9  
UniRef50_O04681 Cluster: Pathogenesis-related genes transcriptio...    31   5.9  

>UniRef50_Q1HQK5 Cluster: Cytochrome c oxidase polypeptide VIIC;
           n=4; Endopterygota|Rep: Cytochrome c oxidase polypeptide
           VIIC - Aedes aegypti (Yellowfever mosquito)
          Length = 67

 Score = 74.5 bits (175), Expect = 5e-13
 Identities = 31/48 (64%), Positives = 39/48 (81%)
 Frame = +3

Query: 3   NHSNGGIPGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 146
           +HS+GGIPGE LPF + NRYKLT  FI++ GSGL AP+ + RHQLLK+
Sbjct: 20  SHSHGGIPGENLPFSLTNRYKLTALFIVFLGSGLGAPFFVLRHQLLKQ 67


>UniRef50_Q1W2C6 Cluster: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc; n=1; Graphocephala
           atropunctata|Rep: Putative mitochondrial cytochrome c
           oxidase polypeptide VIIc - Graphocephala atropunctata
          Length = 65

 Score = 60.1 bits (139), Expect = 1e-08
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +3

Query: 15  GGIPGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 143
           GGIPG  LPF + N++KLT  F++Y GSG+S P+L+ RH L K
Sbjct: 23  GGIPGVNLPFSLDNKFKLTALFVVYFGSGMSVPFLMLRHSLTK 65


>UniRef50_UPI00005189A2 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 71

 Score = 57.6 bits (133), Expect = 6e-08
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +3

Query: 3   NHSNGGIPGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 143
           +H   G PG  LP +I NRY LT  FIL+ GSGLS P+L+ R+ LLK
Sbjct: 25  DHGPEGYPGANLPINIQNRYVLTATFILFFGSGLSLPFLVLRYHLLK 71


>UniRef50_Q7JW00 Cluster: LD14731p; n=7; Arthropoda|Rep: LD14731p -
           Drosophila melanogaster (Fruit fly)
          Length = 66

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = +3

Query: 12  NGGIPGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 146
           +GG+PGE LPF + N+Y++T  F +    G  +P+LI RHQLLKK
Sbjct: 22  HGGVPGENLPFGLTNKYRITALFTIGCVLGFGSPFLIVRHQLLKK 66


>UniRef50_P15954 Cluster: Cytochrome c oxidase subunit 7C,
           mitochondrial precursor; n=46; Deuterostomia|Rep:
           Cytochrome c oxidase subunit 7C, mitochondrial precursor
           - Homo sapiens (Human)
          Length = 63

 Score = 48.4 bits (110), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 26/40 (65%)
 Frame = +3

Query: 24  PGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 143
           PG+ LPF + N++ L     LY GS  + P+L+ RHQLLK
Sbjct: 23  PGKNLPFSVENKWSLLAKMCLYFGSAFATPFLVVRHQLLK 62


>UniRef50_A7RPT2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 78

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 24  PGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLK 143
           PG  +PF   N+ +L +  + Y G+  + P++  R Q+ K
Sbjct: 35  PGLNMPFQTQNKTRLLIVMVAYLGTCFALPFVAVRFQMAK 74


>UniRef50_A6W906 Cluster: Putative uncharacterized protein; n=1;
           Kineococcus radiotolerans SRS30216|Rep: Putative
           uncharacterized protein - Kineococcus radiotolerans
           SRS30216
          Length = 797

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 38  TLRHSQPLQADIVF---HPICGLWTISTLSHHPSPA 136
           TLRH   L AD++     P+    T  TL HHP PA
Sbjct: 195 TLRHDDALPADVLCFTREPLLDASTTVTLHHHPRPA 230


>UniRef50_O04681 Cluster: Pathogenesis-related genes transcriptional
           activator PTI5; n=1; Solanum lycopersicum|Rep:
           Pathogenesis-related genes transcriptional activator
           PTI5 - Solanum lycopersicum (Tomato) (Lycopersicon
           esculentum)
          Length = 161

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 24  PGEXLPFDIHNRYKLTLYFILYAGSGLSAPYLITRHQLLKK 146
           P   LP + ++  ++ LY +L   + L+ PYL  R+QLL +
Sbjct: 5   PQSDLPLNENDSQEMVLYEVLNEANALNIPYLPQRNQLLPR 45


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,511,173
Number of Sequences: 1657284
Number of extensions: 3593775
Number of successful extensions: 6619
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6619
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)