Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_O09
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0080 - 17957276-17957676,17957810-17957921,17958001-179581... 129 3e-30
01_06_1682 - 39130696-39131705,39132355-39132583 31 0.71
12_01_0753 + 6810239-6810661,6812495-6812584,6812724-6812894,681... 31 1.2
12_02_1174 - 26696869-26698191 30 2.2
01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258 30 2.2
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058... 29 3.8
08_01_0329 - 2962018-2962695 29 5.0
10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507... 28 6.6
10_08_0973 - 21963754-21963936,21964089-21964383,21964504-219646... 28 8.7
08_02_1464 - 27317282-27318037 28 8.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 8.7
>01_05_0080 -
17957276-17957676,17957810-17957921,17958001-17958126,
17958199-17958331,17960069-17960193,17960314-17960409,
17960430-17960621,17960694-17960800,17961318-17961426,
17961538-17961624,17963017-17963103,17964254-17964379
Length = 566
Score = 129 bits (311), Expect = 3e-30
Identities = 64/134 (47%), Positives = 92/134 (68%)
Frame = +3
Query: 228 DSMKVIAESVGIATLGDDAAKELADDVTYRLKVIVQDAMKFMHHSKRQKLSITDIDHALK 407
++++VI +SVGIA L D + LA DV YRL+ I+Q+A+K M H+KR L+ D+D AL
Sbjct: 7 ETIEVIGQSVGIANLPADVSAALAPDVEYRLREIMQEAIKCMRHAKRTVLTADDVDSALS 66
Query: 408 IKNNECQYGFIQPDSLPFRFASGGGRELHFIEEKEIDLSEILSAPPPKVPLDVSVRAHWL 587
++N E YGF D L F+ A G ++L +I+++ EI+ AP PK PLD +V AHWL
Sbjct: 67 LRNVEPVYGFASGDPLRFKRAV-GHKDLFYIDDR-----EIIEAPLPKAPLDTAVVAHWL 120
Query: 588 SVDGVQPTVPENPP 629
+++GVQP +PENPP
Sbjct: 121 AIEGVQPAIPENPP 134
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 543 PPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAXKLESVDPISKLSKP 692
PPKVPL++S AH S QP V +PPP + A + ++ P
Sbjct: 359 PPKVPLEMSPPAHATS---PQPLVHYSPPPPLQHAGISSTTPSVNSYQSP 405
>12_01_0753 +
6810239-6810661,6812495-6812584,6812724-6812894,
6813015-6813109,6813538-6813658,6813884-6814015
Length = 343
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 528 ILSAPPPKVPLD--VSVRAHWLSVDGVQPTVPENPPP 632
+LSAPPP P+D S AH P PE PP
Sbjct: 6 LLSAPPPPPPMDEDASAGAHHAFPGPAPPPSPEGAPP 42
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Frame = +3
Query: 537 APPPKVPLDVSVRAHW--LSVDGVQPTVPENPPPLSKEAXKLESV---DPISKLSKPXNK 701
+PPP PL +W +V +PT P+ PPP + S P ++ K
Sbjct: 266 SPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTPPPAITPEPAK 325
Query: 702 DSAGKP 719
+AGKP
Sbjct: 326 PAAGKP 331
>01_06_0113 - 26569803-26569874,26570032-26570111,26570712-26571258
Length = 232
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 519 LSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAXKLESVDP 671
L+ +L AP P D ++ + V+G+ P +P PP+ A + V P
Sbjct: 28 LAVVLMAPIINGPPDPNISIRLVGVEGLDPRLPAPVPPVFDLAVDVAGVSP 78
>06_02_0107 -
11904636-11904699,11904940-11905013,11905671-11905802,
11910309-11911018,11911110-11911852,11911936-11913753,
11914037-11914338
Length = 1280
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +3
Query: 264 ATLGDDAAKELADDVTYRLKVIVQDAMKFM-----HHSKRQKLSITDIDHALK-IKNNEC 425
ATLGDD KE+ + + + ++ QD ++ + H + QKL + A++ KN
Sbjct: 390 ATLGDDQTKEIMEQIKGIIHLVKQDILEEIQAIKSHGPREQKLGHDQVVSAIQDAKNKIT 449
Query: 426 QYG 434
Q G
Sbjct: 450 QIG 452
>08_01_0329 - 2962018-2962695
Length = 225
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +3
Query: 474 GGGRELHFIEEKEIDLSEILSAPPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLSKEAXK 653
GGGR+ +E ++ +L A V L + +H +S T P PP L A
Sbjct: 5 GGGRKAAVTGGEEAEVEALLRAAQDAVMLKLQANSHLVS-SSSSATAPNLPPSLDHPA-A 62
Query: 654 LESVDPI 674
+ DP+
Sbjct: 63 AAAADPL 69
>10_08_0971 -
21949721-21949936,21950051-21950484,21950599-21950791,
21950909-21951007,21951114-21951191,21951275-21951669,
21954317-21954482,21954840-21954927,21955015-21955127,
21955242-21955426,21955840-21955987,21956071-21956349,
21956425-21956529,21956892-21957137,21957367-21957408,
21957539-21957613
Length = 953
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 503 FNEMEFSTSSRCEPKWQRIRLNKSILTLIVFYLQGMIYICNG 378
F+ E+ST +CE LN I +L F +GM++I G
Sbjct: 297 FHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPG 338
>10_08_0973 -
21963754-21963936,21964089-21964383,21964504-21964616,
21964729-21964913,21965054-21965201,21965297-21965575,
21965657-21965761,21965936-21966178,21966426-21966486,
21966734-21966792
Length = 556
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 503 FNEMEFSTSSRCEPKWQRIRLNKSILTLIVFYLQGMIYICNG 378
++ E+ST +CE LN I +L F +GM++I G
Sbjct: 297 YHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPG 338
>08_02_1464 - 27317282-27318037
Length = 251
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 618 ENPPPLSKEAXKLESVDPISKLSKPXNKDSAGK 716
E PPP + A S +P +LS P +K AG+
Sbjct: 12 EWPPPALQAASTTSSSEPCRRLSPPSSKRPAGR 44
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 540 PPPKVPLDVSVRAHWLSVDGVQPTVPENPPPLS 638
PPP P+ + R V G QP P PPPL+
Sbjct: 283 PPPNAPMGMPPRIPPPPVGGTQP--PPPPPPLA 313
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,100
Number of Sequences: 37544
Number of extensions: 365897
Number of successful extensions: 1111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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