Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O07
         (390 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    34   0.85 
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2; ...    32   4.5  
UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    32   4.5  
UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep: D-...    31   6.0  

>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 34.3 bits (75), Expect = 0.85
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 271 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFLPPS-KEKCSDRHNRH 137
           NK + P  Y  + SSP+   S+   GNL FL  S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 283 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPFL 179
           Y FANK +F ++Y+L+ S  I  L SV +G + F+
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAFM 108


>UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 567

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 225 RFAP*APCGGGTFLSCHQVKRNVPTATTAIAPSAKALAADV 103
           RFAP A     +F + HQ ++++ TA   +AP+A A AA +
Sbjct: 251 RFAPAAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPI 291


>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 31.9 bits (69), Expect = 4.5
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 136 DGGCGGRNISLYLVARKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 297
           D GCG  ++SLYL  R   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep:
           D-aminopeptidase - Myxococcus xanthus (strain DK 1622)
          Length = 419

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -1

Query: 201 GGGTFLSCHQVKRNVPTATTAIAPSAKALAADVLLPC 91
           GGGT + CH  K  + TA+  +  S       VLL C
Sbjct: 198 GGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQC 234


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,609,124
Number of Sequences: 1657284
Number of extensions: 6171832
Number of successful extensions: 15472
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15472
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)