Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_O05
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5ID06 Cluster: ABC transporter, transmembrane permease...    34   2.1  
UniRef50_UPI0000661166 Cluster: UPI0000661166 related cluster; n...    34   2.8  
UniRef50_Q5G8Y4 Cluster: Gp5; n=1; Enterobacteria phage ES18|Rep...    33   6.4  
UniRef50_Q7R0N1 Cluster: GLP_154_580_5364; n=1; Giardia lamblia ...    32   8.4  

>UniRef50_A5ID06 Cluster: ABC transporter, transmembrane permease;
           n=4; Legionella pneumophila|Rep: ABC transporter,
           transmembrane permease - Legionella pneumophila (strain
           Corby)
          Length = 298

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 73  IGHKFWCNYQYVKLETYYNVYSL-XRILHPLVQTYLFIVNSLLIMVPNNKLKHL-SRLPR 246
           +G+ FW +     L T  + ++   R+LHP+   Y FI   + I +PN  +  + S +P 
Sbjct: 38  LGYAFWQSLGPALLLTLVSFFTKQTRLLHPVYWPYFFICGLIGIAIPNTNMYFIASHIPA 97

Query: 247 GFI 255
           G +
Sbjct: 98  GLL 100


>UniRef50_UPI0000661166 Cluster: UPI0000661166 related cluster; n=1;
           Takifugu rubripes|Rep: UPI0000661166 UniRef100 entry -
           Takifugu rubripes
          Length = 253

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +3

Query: 237 VTSWLYLGLMHIIKLYHISVILILRLAFQVNSSIDLWHY 353
           V +W Y G+  +++LY+  + L+L   + + + + LW+Y
Sbjct: 62  VLTWYYTGITLVLQLYYSGITLVLHRYYTIITLVLLWYY 100


>UniRef50_Q5G8Y4 Cluster: Gp5; n=1; Enterobacteria phage ES18|Rep:
           Gp5 - Enterobacteria phage ES18
          Length = 449

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 79  HKFWCNYQYVKLETYYNVYSLXR 147
           H  WC Y + +L TY N+YSL R
Sbjct: 37  HSAWCEYGFPELVTYENLYSLYR 59


>UniRef50_Q7R0N1 Cluster: GLP_154_580_5364; n=1; Giardia lamblia ATCC
            50803|Rep: GLP_154_580_5364 - Giardia lamblia ATCC 50803
          Length = 1594

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +1

Query: 70   TIGHKFWCNYQYVKLETYYNVYSLXRILHPLVQTYLFIVNSLLIMVPNNKLKHLSRLP 243
            TIG+   C   Y  +  YY   +L  +L+ LV  YLFI       + N   K +S+LP
Sbjct: 1190 TIGNT-QCGMSYGDMCHYYTQTTLLPMLYSLVPRYLFIHGVFKQYIGNKNNKSISKLP 1246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,047,022
Number of Sequences: 1657284
Number of extensions: 8181336
Number of successful extensions: 14454
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14450
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)