Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_N21
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0042 + 295608-296222,298479-298925 222 2e-58
06_01_0033 - 346273-347355 218 4e-57
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 56 2e-08
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 56 2e-08
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 52 4e-07
04_04_0724 + 27578337-27578371,27578492-27578607,27578717-275788... 46 2e-05
08_01_0567 - 5040389-5040631,5042124-5042264 34 0.088
04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654... 33 0.15
02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 31 1.1
03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566... 29 2.5
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 29 3.3
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 4.4
07_03_1721 - 29023979-29025295 29 4.4
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 28 5.8
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 28 7.7
07_01_0743 + 5678086-5678098,5678436-5678560,5678666-5678800,567... 28 7.7
08_01_0389 + 3437383-3437651,3438279-3438396,3438914-3439018,343... 25 9.2
>02_01_0042 + 295608-296222,298479-298925
Length = 353
Score = 222 bits (543), Expect = 2e-58
Identities = 97/183 (53%), Positives = 140/183 (76%)
Frame = +2
Query: 119 SKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSS 298
+K++++G G VGMA A ++LT+++ + IALVD + DKL+GEM+DLQH +AF+ ++ S
Sbjct: 40 TKISVIGAGNVGMAIAQTILTRDMADEIALVDAVPDKLRGEMLDLQHAAAFLPRVRLVSD 99
Query: 299 TDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPV 478
TD ++T GS + +VTAG RQ GESRL+L+QRN + ++I+P L ++SP+ +L+I SNPV
Sbjct: 100 TDLAVTRGSDLAIVTAGARQIPGESRLNLLQRNVALFRKIVPALAEHSPEALLLIVSNPV 159
Query: 479 DILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIGEHGDSSVPX 658
D+LTYV WK+SG P RVIGSGTNLDS+RFR+LL++ L + Y++GEHGDSSV
Sbjct: 160 DVLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLQVNAQDVQAYMVGEHGDSSVAI 219
Query: 659 WSA 667
WS+
Sbjct: 220 WSS 222
>06_01_0033 - 346273-347355
Length = 360
Score = 218 bits (532), Expect = 4e-57
Identities = 95/182 (52%), Positives = 137/182 (75%)
Frame = +2
Query: 122 KVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSST 301
K++++G G VGMA A ++LTQ++ + I L+D +ADK++GEM+DLQH +AF+ I S T
Sbjct: 40 KISVIGAGNVGMAIAQTILTQDLADEIVLIDAVADKVRGEMLDLQHAAAFLPRVNIVSGT 99
Query: 302 DYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVD 481
+ S+T S + +VTAG RQ GE+RL+L+QRN + ++I+P + SP+++LVI SNPVD
Sbjct: 100 EVSLTRSSDLVIVTAGARQIPGETRLNLLQRNVSLFRKIVPAAAEASPESVLVIVSNPVD 159
Query: 482 ILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIGEHGDSSVPXW 661
+LTYV WK+SG P RVIGSGTNLDS+RFR+LL++ L ++ Y++GEHGDSSV W
Sbjct: 160 VLTYVAWKLSGFPASRVIGSGTNLDSSRFRFLLAEHLEVSAQDVQAYMVGEHGDSSVALW 219
Query: 662 SA 667
S+
Sbjct: 220 SS 221
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 56.4 bits (130), Expect = 2e-08
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Frame = +2
Query: 122 KVTIVGV-GQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQH-GSAFMRNAKIQS 295
KV I+G G +G A M + ++++L D+ G D+ H S + +
Sbjct: 28 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAGTP--GVAADVSHINSPALVKGFVGE 85
Query: 296 STDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNP 475
GS + ++ AGV ++ G +R DL N ++K + + KY P+ ++ + SNP
Sbjct: 86 EQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALVNMISNP 145
Query: 476 VDILTYV---TWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIGEH-GD 643
V+ + +K +G + + T LD R + + + + T + ++G H G
Sbjct: 146 VNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTEVNVPVVGGHAGI 205
Query: 644 SSVPXWS 664
+ +P +S
Sbjct: 206 TILPLFS 212
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 56.4 bits (130), Expect = 2e-08
Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Frame = +2
Query: 122 KVTIVGV-GQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNAKIQSS 298
KV I+G G +G + M + ++++L D+ G D+ H +A +
Sbjct: 29 KVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTP--GVAADVSHINAPAQVKGFMGD 86
Query: 299 TDYS-ITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNP 475
GS I ++ AGV ++ G +R DL N ++K + + KY P+ ++ + SNP
Sbjct: 87 DQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNP 146
Query: 476 VDILTYV---TWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIGEH-GD 643
V+ + +K +G + + T LD R + + + + T + ++G H G
Sbjct: 147 VNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGI 206
Query: 644 SSVPXWS 664
+ +P +S
Sbjct: 207 TILPLFS 213
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Frame = +2
Query: 122 KVTIVGV-GQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQH--GSAFMRNAKIQ 292
KV ++G G +G + M + + + L D++ G D+ H +A +R
Sbjct: 44 KVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVV--NTPGVTADVSHMDTTAVVRGFLGP 101
Query: 293 SSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASN 472
+ + ++T G + ++ AG+ ++ G +R DL +N +++ + + K P+ I+ + SN
Sbjct: 102 NQLEAALT-GMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIVNLISN 160
Query: 473 PVD----ILTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYIIGEHG 640
PV+ I V K R++G T LD AR +++ LGI + ++G H
Sbjct: 161 PVNSTVPIAAEVFKKAGTYDPKRLLGV-TTLDVARANTFVAEVLGIDPKDVNVPVVGGHA 219
Query: 641 DSSV 652
++
Sbjct: 220 GVTI 223
>04_04_0724 +
27578337-27578371,27578492-27578607,27578717-27578875,
27578954-27579129,27580406-27580683,27580759-27580894,
27580984-27581095,27581177-27581268
Length = 367
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Frame = +2
Query: 134 VGVGQVGMAAAFSMLTQNVTNNIALVDM--MADKLKGEMMDLQHGSAFMRNAKIQSSTDY 307
+G V M A ML + + L+D+ A+ L G M+L + + + +S +
Sbjct: 53 IGYAIVAMIARGLMLGADQPVVLHLLDLPVAANALNGVRMELIDAALPLLRGVVATSDEA 112
Query: 308 SITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLIKY-SPDTILVIASNPVDI 484
G + +V G +R+G R DL+ +N + K L ++ +P+ +++ +NP +
Sbjct: 113 EAFKGVNVAIVIGGWPRRDGMERKDLISKNVTIYKSQASALHQHAAPNCKVLVVANPANT 172
Query: 485 LTYVTWKISGLPKHRVIGSGTNLDSARFRYLLSDRLGIATTSCHGYII-GEHGDSSVP 655
V + + + I T LD R ++++L + II G H + P
Sbjct: 173 NALVLKEFAPAIPAKNITCLTRLDHNRALGQVAEKLNVHVGDVKNAIIWGNHSSTQFP 230
>08_01_0567 - 5040389-5040631,5042124-5042264
Length = 127
Score = 34.3 bits (75), Expect = 0.088
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 4/46 (8%)
Frame = +2
Query: 371 SRLDLVQRN--TDVLKQIIPQLIKYSPDTILVIASNPV--DILTYV 496
++L+L++ N +L +I+P L + SP+ LV+ S+P D+LTYV
Sbjct: 3 TKLELMRSNYLKKLLTEIVPALAENSPEAALVVVSDPPVDDVLTYV 48
>04_04_0672 +
27164628-27164792,27164903-27164965,27165298-27165408,
27165454-27165537,27166081-27166194,27166901-27167494,
27167604-27167675,27167761-27167997
Length = 479
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 85 PARAREGGRNLEQGDHCRGRSGWDGRSFLYADAECYE*--HRSSRHDG*QIERRDDGPAA 258
PAR E GR GD R RS W + E E HR+SR DG Q ERR+DG
Sbjct: 36 PAREEEEGR----GDE-RSRSTWAEVVSDHKGGEAEERPDHRNSRRDGRQ-ERREDGDWE 89
Query: 259 RISIHEERQ 285
R+ ++ Q
Sbjct: 90 RVDGRKQHQ 98
>02_05_1331 +
35736543-35736638,35737407-35737525,35737670-35737715,
35738117-35738172,35738452-35738547,35738844-35738961,
35739406-35739672,35740023-35740124,35740302-35740659,
35740750-35740863,35741045-35741676,35741895-35742103,
35742597-35742819,35743419-35743538,35743888-35743914,
35744281-35745045,35745431-35748511
Length = 2142
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -1
Query: 451 CVRTVLYQLRDYLFKHIGVSLHEIETRFTFALSNTSSNHADLRASCY 311
CVR + +LRDY G S ++E F + N D+ SCY
Sbjct: 630 CVRALKNELRDYSANEWGDSKLKLEPEPIFIIDIIEENGEDIVQSCY 676
>03_05_0327 -
23154014-23154942,23155169-23155316,23155606-23156622,
23156753-23157217,23160258-23161247
Length = 1182
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 401 DVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIGSGTNLDS 559
++LK ++P+L D L + S+ VD+L + + ++V+G GT L S
Sbjct: 444 EILKVLLPRLSDMVSDPALSVRSSAVDLLLAIR-DLRSFQFNKVVGLGTLLSS 495
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 104 VDETWSKVTIVGVGQVGMAAAFSMLTQNVTNNIALVDMMADKLKGEMMDLQHGSAFMRNA 283
+ T KV I+G G G+AAA + N + V AD++ G MM +G M+
Sbjct: 1792 LQRTGKKVAIIGSGPAGLAAADQL---NKMGHFVTVFERADRIGGLMM---YGVPNMKTD 1845
Query: 284 KIQ 292
KI+
Sbjct: 1846 KIE 1848
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 510 LIFHVTYVRISTGLLAITNIVSGLYFISCGIICLST 403
++F +T+V T L + I SG +F G ICL T
Sbjct: 435 VVFLMTFVIGQTFLAVLCRIKSGTFFFFAGWICLMT 470
>07_03_1721 - 29023979-29025295
Length = 438
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 488 SEYPRGYWRSPILCPDCTLSAA 423
S +P G W SP + P+C++SA+
Sbjct: 312 SPWPNGAWSSPWIQPNCSVSAS 333
>03_02_0789 +
11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 398 TDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIG 538
TDVL ++ +++K PD LV+ S ++ + T+ SG P +V G
Sbjct: 195 TDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQTY-FSGAPLMKVPG 240
>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Frame = +2
Query: 365 GESRLDLVQRNTDVLKQIIPQLIKYSPDTILVIASNPVDILTYVTWKISGLPKHRVIG-- 538
G L+ N +V K I ++ D + + S VD+L G+ KH V+G
Sbjct: 1708 GLDNLNFEHFNEEVCKNIHASTVRALADMVQALVSMYVDVLAKGLISRQGVYKHYVLGLL 1767
Query: 539 ---------SGTNLDSARFRYLLSDRLGIATTSCHGYI 625
N+DS + + +LS+ + + SC YI
Sbjct: 1768 ASLEGRTEARSDNIDSEKLQAVLSE-IELNYDSCKEYI 1804
>07_01_0743 +
5678086-5678098,5678436-5678560,5678666-5678800,
5679128-5679200,5679581-5679654,5680292-5680396,
5680637-5680881,5680965-5681052,5681202-5681244,
5681319-5681475,5681648-5681776,5682012-5682084,
5682281-5682445,5682530-5682544,5682651-5682780,
5684517-5684651,5684880-5684945,5685088-5685170,
5685503-5685549,5685736-5685814,5685914-5686006
Length = 690
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 74 KKLFQPVHEKVDETWSKVTIVGVGQVGMAAAFSMLTQ 184
K LF P E KV I+G G GM+ A +L Q
Sbjct: 7 KGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQ 43
>08_01_0389 +
3437383-3437651,3438279-3438396,3438914-3439018,
3439983-3440180,3440269-3440355
Length = 258
Score = 24.6 bits (51), Expect(2) = 9.2
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 522 LGSPLIFHVTYVRISTGLLAITNIVSGLY-FISCGIICLSTSVFLCTRSRR 373
LG PL+ + + G + +Y FI G+I TS+F C + R
Sbjct: 65 LGRPLLLLLDVSSLPDGTAERLSAAWFIYAFIGVGVILFITSIFGCAGASR 115
Score = 21.4 bits (43), Expect(2) = 9.2
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 258 CCRSIISPFNLSAI 217
CC S +S FN+ I
Sbjct: 118 CCLSFVSKFNMHVI 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,513,039
Number of Sequences: 37544
Number of extensions: 404256
Number of successful extensions: 1197
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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