Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_N19
         (448 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    27   6.2  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     27   6.2  
U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AF078787-2|AAC26950.1|  407|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 186 YDPVICSTI-NENPP*FIC 239
           YDPVIC+ + + +PP F+C
Sbjct: 274 YDPVICADVADTSPPIFLC 292


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical
           protein E03A3.6 protein.
          Length = 2089

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 186 YDPVICSTI-NENPP*FIC 239
           YDPVIC+ + + +PP F+C
Sbjct: 274 YDPVICADVADTSPPIFLC 292


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/19 (52%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 186 YDPVICSTI-NENPP*FIC 239
           YDPVIC+ + + +PP F+C
Sbjct: 267 YDPVICADVADTSPPIFLC 285


>U80452-6|AAB37858.1|  592|Caenorhabditis elegans Hypothetical
           protein C16C8.16 protein.
          Length = 592

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 310 YKQIRFIQNKIIKNMTFRLKT*KEQIN 230
           ++Q++  QNK I+N+   LKT K ++N
Sbjct: 99  FQQVQENQNKSIENLNSELKTVKAELN 125


>AF078787-2|AAC26950.1|  407|Caenorhabditis elegans Hypothetical
           protein T17A3.3 protein.
          Length = 407

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = -2

Query: 201 ISLDHIGIQPKIFIFLTCLNYNT 133
           ++LD+  ++PK+F  +  LNYN+
Sbjct: 187 LALDYHSLKPKVFHSIVSLNYNS 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,518,017
Number of Sequences: 27780
Number of extensions: 121085
Number of successful extensions: 165
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)