Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_N16
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 180 7e-46
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 130 1e-30
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 35 0.071
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 35 0.071
U64849-4|AAC48054.2| 217|Caenorhabditis elegans Saposin-like pr... 31 0.66
Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical pr... 28 6.2
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 180 bits (439), Expect = 7e-46
Identities = 78/138 (56%), Positives = 106/138 (76%), Gaps = 2/138 (1%)
Frame = +1
Query: 136 VNVXSTHVTSXNLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIK 315
VNV +T ++ NLSRH+ML WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K
Sbjct: 6 VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVK 65
Query: 316 FKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANYGGA 495
+ + LE +++ N+K++Q +K +GV+K++P+DKL+KG+FQDNFEFLQWFKK FDANY G
Sbjct: 66 WNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQDNFEFLQWFKKLFDANYDGH 125
Query: 496 AYDAVAQR--EGLPMGHG 543
YD + R EGLP G
Sbjct: 126 EYDPMQARNGEGLPTEGG 143
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 130 bits (313), Expect = 1e-30
Identities = 61/134 (45%), Positives = 90/134 (67%), Gaps = 2/134 (1%)
Frame = +1
Query: 130 MAVNVXSTHVTSXNLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 309
M VNV + VT+ LSR + +AWVN+ L+S+F K+EE+ +GAAYCQ +LF ++ +K+
Sbjct: 1 MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKK 59
Query: 310 IKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKLVKGRFQDNFEFLQWFKKFFDANY- 486
+KF E + + N+K+L +K +G+DK V ++K+ K +FQDN EFLQWF KF++AN
Sbjct: 60 VKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKMKKAKFQDNMEFLQWFYKFYNANLT 119
Query: 487 -GGAAYDAVAQREG 525
YDAV R G
Sbjct: 120 TEPEEYDAVGARFG 133
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 34.7 bits (76), Expect = 0.071
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 GARFGSKFSQICSLLSHSKIVSXQAQFTVKSFFHQGLIHXKNGCKCXFYARYV 164
G + G S++ L + + Q + T++ FF G+++ +NG KC +++
Sbjct: 1206 GVQIGEHISKLLELSENKSKKTLQMEDTIEDFFDDGIVNNQNGEKCPIALQFI 1258
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 34.7 bits (76), Expect = 0.071
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 6 GARFGSKFSQICSLLSHSKIVSXQAQFTVKSFFHQGLIHXKNGCKCXFYARYV 164
G + G S++ L + + Q + T++ FF G+++ +NG KC +++
Sbjct: 1206 GVQIGEHISKLLELSENKSKKTLQMEDTIEDFFDDGIVNNQNGEKCPIALQFI 1258
>U64849-4|AAC48054.2| 217|Caenorhabditis elegans Saposin-like
protein family protein20 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = -1
Query: 546 APVPHGQTFSLRHCVICRTSIVGVKEFLEPLQKLKIILETTLHQFVN 406
+PV T S C C+++ V FL P++K+++I +T L FVN
Sbjct: 125 SPVVESGTLSNIICTNCQSA---VNAFLAPIKKVELITKTELTDFVN 168
>Z82076-1|CAB04934.1| 363|Caenorhabditis elegans Hypothetical
protein W07G1.2 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = -1
Query: 486 IVGVKEFLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDS 307
++G + L ++ + L F + YL+ +F + YF + + ICLK
Sbjct: 4 LIGNSSYFRVLTPTTVLHDHRLRGFPDNIYLIVYGIFHLLIMYFVLKCAY---ICLKIRV 60
Query: 306 FHW 298
FHW
Sbjct: 61 FHW 63
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 271 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 381
M M+F G P K I F +++ +HEY++ ++I A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328
>U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical
protein F41C3.6 protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 468 FLEPLQKLKIILETTLHQFVNGYYLVHTHLFKTSL*YFKVLY 343
F+E L+ LK +L++ LH N Y+L H + S F +LY
Sbjct: 21 FVE-LRSLKNLLKSILHNIENDYFLAHQKVRLYSSHNFVMLY 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,577,727
Number of Sequences: 27780
Number of extensions: 350733
Number of successful extensions: 1032
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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