Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_N14
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   0.97 
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   3.9  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           25   3.9  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   5.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.2  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   5.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   5.2  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 830 DQLARAKHLHARVLFNGHILSVEPGDLGLGVSLDAA 723
           D   RA H H  V+ +G +  ++P DL +G +  AA
Sbjct: 249 DPQRRAPHSHHLVIKSGELDLIDPHDLDVGGAAGAA 284


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 667 SWS--PIAPTWTTSATGWCSRAASRDTPSP 750
           +WS  P  PT TT+ T W    A+  TP+P
Sbjct: 173 TWSDQPPPPT-TTTTTVWTDPTATTTTPAP 201


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 667 SWS--PIAPTWTTSATGWCSRAASRDTPSP 750
           +WS  P  PT TT+ T W    A+  TP+P
Sbjct: 173 TWSDQPPPPT-TTTTTVWTDPTATTTTPAP 201


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 132 LRESHQYYRAVVRMHLVLLFTVAALLGSC 218
           ++E  +Y   V+    + +FT+A +LG+C
Sbjct: 491 VKEDWKYVALVLDRLFLWIFTIACVLGTC 519


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 660 PRIVVSYSTYVDNIGNRVVLPCRVKGHPKPKI 755
           PRI      Y+   G++ ++  +++ + KPKI
Sbjct: 694 PRIEAKNDAYIPKGGDKKIISTKLQWNAKPKI 725


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 669 VVSY-STYVDNIGNRVVLPCRVKGHPKPKI 755
           +V Y S Y++NI +R VLP    G+ +P I
Sbjct: 23  MVDYISNYLENIRDRRVLPTVQPGYLRPLI 52


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 669 VVSY-STYVDNIGNRVVLPCRVKGHPKPKI 755
           +V Y S Y++NI +R VLP    G+ +P I
Sbjct: 54  MVDYISNYLENIRDRRVLPTVQPGYLRPLI 83


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,929
Number of Sequences: 2352
Number of extensions: 15831
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)