Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_N10
(711 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 27 0.18
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 27 0.18
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 27 0.18
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 25 0.93
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.2
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 24 1.2
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 3.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.6
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.18
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 103 K*FTSLLVNFITN-SNYSG*KNYTKKTY 23
K +SL N+I+N SNY+ NY KK Y
Sbjct: 80 KIISSLSNNYISNISNYNNNNNYNKKLY 107
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 27.1 bits (57), Expect = 0.18
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 103 K*FTSLLVNFITN-SNYSG*KNYTKKTY 23
K +SL N+I+N SNY+ NY KK Y
Sbjct: 80 KIISSLSNNYISNISNYNNDNNYNKKLY 107
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 27.1 bits (57), Expect = 0.18
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 103 K*FTSLLVNFITN-SNYSG*KNYTKKTY 23
K +SL N+I+N SNY+ NY KK Y
Sbjct: 318 KIISSLSNNYISNISNYNNNNNYNKKLY 345
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 24.6 bits (51), Expect = 0.93
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 264 YNNILRDF-GTFFFVALLLHFHMLFVICG-----NFFTTNTSSDV 148
Y ++ D G +FF+ +HF LF G FFT TS+++
Sbjct: 443 YQKMVADVVGDYFFICPSIHFAQLFADRGMKVYYYFFTQRTSTNL 487
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -1
Query: 225 VALLLHFHMLFVICGNFFTTNTSSDVNVSEYNCFHI 118
V ++ + H+ FFT +S N EY+C +
Sbjct: 198 VQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -1
Query: 225 VALLLHFHMLFVICGNFFTTNTSSDVNVSEYNCFHI 118
V ++ + H+ FFT +S N EY+C +
Sbjct: 198 VQVVKNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = -2
Query: 488 RSPEQHVSSTLFITKRREFDRRHLAFNSNMANSLGQQQSEQRHL 357
R PE V+S I+ + E D ++A + + + Q++++QR++
Sbjct: 1618 RKPEHFVASYALISNQCEGDSLNVAKSLQDHDCIRQERTQQRNV 1661
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 24.2 bits (50), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Frame = -1
Query: 264 YNNILRDF-GTFFFVALLLHFHMLFVICG-----NFFTTNTSSD 151
Y ++ D G +FF+ +HF LF G FFT TS++
Sbjct: 443 YQKMVADVVGDYFFICPSIHFAQLFADRGMKVYYYFFTQRTSTN 486
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 3.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 91 SLLVNFITNSNYSG*KNYTKKTY 23
S L N SNY+ NY KK Y
Sbjct: 83 SSLSNNYKYSNYNNYNNYNKKLY 105
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 6.6
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 150 VNVSEYNCFHIKQYP---RNNSLLYL*TL*PIRITAAEKTTQRKHMIDR 13
V++ Y F I QY RN S YL L R AE QRK+++DR
Sbjct: 411 VSIIMYIAFIILQYAGLLRNRSE-YLNHL---RANVAEGRNQRKNVLDR 455
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,301
Number of Sequences: 438
Number of extensions: 4795
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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