Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_F_N07
(776 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0138 - 5745893-5745924,5746824-5747580 30 1.8
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 29 3.1
06_01_0876 - 6712224-6712812,6713777-6715233 24 3.6
12_01_0102 - 788403-788937,789051-789164,789323-789687 29 4.1
11_01_0102 - 749013-749538,749630-749749,749849-750210 29 4.1
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 29 5.4
03_01_0403 - 3133568-3134440,3135131-3135494,3136341-3136408,313... 29 5.4
10_06_0184 - 11577331-11577360,11577616-11577722,11578048-115781... 28 7.2
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 28 7.2
05_05_0200 - 23171803-23171906,23172304-23173951 28 7.2
03_03_0279 - 16134422-16134608,16134703-16134947,16135046-161353... 28 7.2
02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237 28 7.2
09_02_0367 + 7972644-7972709,7974108-7974164,7975835-7976080 28 9.5
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 28 9.5
06_01_0135 + 1039018-1041474 28 9.5
>10_02_0138 - 5745893-5745924,5746824-5747580
Length = 262
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 373 AGRMPGQLNVLLAEAGVPYDDVFEMDEINDEFPETDLVLVIGANDTVNSAA 525
A PG+ N A G+ Y D +D I D+F L+L+ +D N+ A
Sbjct: 63 AAARPGKGNNWRAVLGMRYGDAATLDTIKDQFQRLSLLLLHHPDDDNNNNA 113
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 115 KAMNRSLPNVILGGYGVTTGGSARPTDATHTELNVDSVAELIHRASNIIITPGYGLCVAK 294
K + ++P+ L G G A HT + +S A L RA++ ++ +G
Sbjct: 248 KTVGPTVPSAYLDG---RLPGDASYGFDLHTPMAAESKAWLDERAASSVVYVSFGSLATP 304
Query: 295 AQYPIAELVDLLKESGKKVRFAIH-PVAGRMP 387
+ +AEL L++SG+ + + G++P
Sbjct: 305 SAVQMAELAHGLRDSGRFFLWVVRSSETGKLP 336
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 310 AELVDLLKESGKKVRFAIHPVAGRMPGQLNVLLAEAGVP 426
AELV L++ G V FA HPV L LL G P
Sbjct: 135 AELVRKLRDKG--VDFAAHPVEPSAGVMLLDLLVNFGFP 171
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 412 EAGVPYDDVFEMDEINDEFPE 474
+ GV +DDV +DE +F E
Sbjct: 210 KTGVTFDDVAGVDEAKQDFQE 230
>12_01_0102 - 788403-788937,789051-789164,789323-789687
Length = 337
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 586 QVVVMKRSMGVGYAAVDNPIFYNPNTAML 672
+ VM+ ++G+G A +D+P FY+PN ++
Sbjct: 302 ETTVMEEALGLG-ADLDDPYFYDPNLLLI 329
>11_01_0102 - 749013-749538,749630-749749,749849-750210
Length = 335
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 586 QVVVMKRSMGVGYAAVDNPIFYNPNTAML 672
+ VM+ ++G+G A +D+P FY+PN ++
Sbjct: 300 ETTVMEEALGLG-ADLDDPYFYDPNLLLI 327
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 298 QYPIAELVDLLKESGKKVRFAIHPVAGRMPGQLNVLLAEAGVPY 429
+Y + + ++ +KE+ V A+H G G + LL AGVPY
Sbjct: 502 KYSLQQWINHVKEAQAVVFIAVHGGIGE-DGTIQSLLGSAGVPY 544
>03_01_0403 -
3133568-3134440,3135131-3135494,3136341-3136408,
3137184-3137857,3138093-3138105
Length = 663
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 644 IGLSTAAYPTPIDLFITTT*F-AFHTLSTGIPAI---GEFGSSSAALFTVSLAPIT 489
I S + P + LF+T+T AFH + G+PA+ G G +A + VS IT
Sbjct: 151 ISASLGSTPPLMPLFMTSTEIGAFHAMQLGVPAVFSAGNDGPDAAMVQNVSPWVIT 206
>10_06_0184 -
11577331-11577360,11577616-11577722,11578048-11578126,
11578213-11578299,11580935-11581207,11581298-11581447,
11582186-11582785
Length = 441
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 553 GMPVLKVWKANQVVVMKRSMGVGYAAVDNPIFYNPN 660
G + K WK V+V RS+ V A DNP+ +NP+
Sbjct: 397 GYTIPKGWK---VIVWIRSLHVDPAYYDNPLSFNPD 429
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = -3
Query: 468 EFIINFIH----FKYVIVWNSSFGQ*YVELSGHTT 376
EF+ NFIH +++ ++WNS+F Y + +TT
Sbjct: 141 EFVENFIHCQGHYRFWLLWNSAFRVTYSRMMLYTT 175
>05_05_0200 - 23171803-23171906,23172304-23173951
Length = 583
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 WALCAEGFM--LNNSLMTIVGALIGSSGAILSYIMCKAMNRSLPN 141
W +C + LN +L + A + SGAIL +M +NR+LP+
Sbjct: 109 WVMCKDWIKEPLNMALFAWI-ACVTVSGAILFLVMTGMLNRALPS 152
>03_03_0279 -
16134422-16134608,16134703-16134947,16135046-16135364,
16135451-16135675,16135780-16135946,16136030-16136146,
16136234-16136407,16136489-16136584,16136669-16136885,
16137005-16137123,16137249-16137441,16137562-16137713,
16137809-16137938,16138667-16138776
Length = 816
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 175 GSARPTDATHTELNVDS-VAELIHRASNIIITPGYGLCVAKAQYPIAELVDLLKESGKKV 351
G+ R + + L+ D+ +E HR + + G+G C ++Q I L+DLL+
Sbjct: 211 GALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWGDCAKRSQETIHLLLDLLEAPDPS- 269
Query: 352 RFAIHPVAGRMPGQLNVLL 408
+ G +P NV++
Sbjct: 270 --TLEKFLGTIPMVFNVVI 286
>02_04_0445 + 22991394-22992101,22993061-22993252,22993419-22994237
Length = 572
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +1
Query: 91 AILSYIMCKAMNRSLPNVILGGYGVTTGGSARPTDATHTELNVDSVAELIHRASNIIITP 270
AI+S + SLP+ + + GS+ DAT +E + +EL A I+P
Sbjct: 48 AIVSPAKTLNSHLSLPHATISSFANADNGSSGQADATESEEEQNGESELSEMAKAFHISP 107
Query: 271 GYGLCVA 291
+ ++
Sbjct: 108 RMAMSIS 114
>09_02_0367 + 7972644-7972709,7974108-7974164,7975835-7976080
Length = 122
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 552 GNAGTQSMESESGCSNEKINGSWICGRGQPDI-LQSQH 662
G + ESGC + K+ ++ G QPD ++QH
Sbjct: 58 GTISGEEQAQESGCMDAKLQALYMHGHAQPDADAETQH 95
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 426 WNSSFGQ*YVELS--GHTTCNRVNSKTHFL 343
W SFG+ ++ELS HTT NRV S H L
Sbjct: 837 WGLSFGK-FLELSFSNHTTANRVASCGHSL 865
>06_01_0135 + 1039018-1041474
Length = 818
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 54 HDYSWRAHW*FWCYLVVHNVQSNEQISPQRHLGWLWSDDRWISSTHRRDTH 206
HD W W ++V+ SNE+ + H LW +I+ TH
Sbjct: 722 HDSMWTLLAEVWTEIIVYVAPSNEERTIMAHKNVLWQGGEFITVLWALMTH 772
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,043,240
Number of Sequences: 37544
Number of extensions: 434947
Number of successful extensions: 1137
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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