Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_N05
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical ...   274   3e-74
U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical pr...    28   6.4  
L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical p...    27   8.4  
AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AC024812-3|AAF59551.1|  183|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.5 protein.
          Length = 183

 Score =  274 bits (672), Expect = 3e-74
 Identities = 124/175 (70%), Positives = 150/175 (85%)
 Frame = +1

Query: 103 SLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRG 282
           ++F ++R+MN RQ  YQ L+F M+VSSALMIWKG+MV+TGS+SP+VVVLSGSMEPAF+RG
Sbjct: 8   AMFSEIRQMNIRQLFYQCLNFAMVVSSALMIWKGMMVITGSDSPVVVVLSGSMEPAFYRG 67

Query: 283 DLLFLTNYPEEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRG 462
           DLL LTN  E+PVRVG+I VFKVEGR+IPIVHRV+K+HEK+    K LTKGDNN VDDRG
Sbjct: 68  DLLLLTNDLEDPVRVGDITVFKVEGREIPIVHRVIKVHEKSADNTKILTKGDNNQVDDRG 127

Query: 463 LYAQGQLWLTKKDVVGRARGFLPYVGMVTIYMNEYPKFKFAVLACLAIYVLXHRE 627
           LYA GQLWL++ DVVGR +G LPYVGMVTI MN+YPK K+AVLA L ++VL H+E
Sbjct: 128 LYAPGQLWLSRTDVVGRTKGLLPYVGMVTIIMNDYPKLKYAVLAFLGLFVLLHKE 182


>U88166-2|AAO44911.1|  118|Caenorhabditis elegans Hypothetical
           protein M01A12.3 protein.
          Length = 118

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 567 IFIHIYGDHSNIWQKSSC 514
           +FIH++GDH N+ +   C
Sbjct: 32  VFIHLFGDHLNVLEDDEC 49


>Z81062-2|CAB02946.1|  269|Caenorhabditis elegans Hypothetical
           protein F15A4.2 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -1

Query: 224 LPVTTIKPFHIIKAEDTIIPKLNTWYMNCRLFIRRTSSNRLSNIVNL 84
           +P   ++PFH++     +I ++     N  + I RT+S ++  I  L
Sbjct: 1   MPRYIVRPFHLLNLPTVVISEVLNHLKNIDICILRTTSRKIRTIGKL 47


>Z22180-5|CAA80174.2|  717|Caenorhabditis elegans Hypothetical
           protein K11H3.4 protein.
          Length = 717

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 99  QHC*FNQLFLKEIMQCSVWLLKFFPVADSCRH 4
           ++C F QLF  E   C++  + FF   + CRH
Sbjct: 244 KYCNFTQLFQNECTFCNIKFISFF---EMCRH 272


>L16685-2|AAY43982.1|  262|Caenorhabditis elegans Hypothetical
           protein ZC21.9 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 567 IFIHIYGDHSNIWQKSSCTANHIFFS-EPQLALG 469
           IF+ ++GD SN   KSS T   + F+ EP  A G
Sbjct: 168 IFVEVHGDDSNTTTKSSPTLEFVQFTLEPPSADG 201


>Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 310 EEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRGL 465
           E P++V  IV+    G D+PI+ R+L   +KN   + FL     + V++  L
Sbjct: 791 ETPLKVKCIVML---GVDLPIIRRILSYLDKNELKMIFLNYDAYSRVEEEEL 839


>AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 310 EEPVRVGEIVVFKVEGRDIPIVHRVLKLHEKNNGTVKFLTKGDNNSVDDRGL 465
           E P++V  IV+    G D+PI+ R+L   +KN   + FL     + V++  L
Sbjct: 791 ETPLKVKCIVML---GVDLPIIRRILSYLDKNELKMIFLNYDAYSRVEEEEL 839


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,233,566
Number of Sequences: 27780
Number of extensions: 329383
Number of successful extensions: 783
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)