Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M23
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical pr...   107   8e-24
AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical ...   106   2e-23
AF125951-4|AAT68898.1|  342|Caenorhabditis elegans Hypothetical ...   106   2e-23
U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical pr...    35   0.052
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin ...    33   0.21 
Z77662-4|CAB01193.1|  248|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z77662-3|CAB01194.1|  284|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical ...    30   1.5  
AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    30   1.9  
Z69884-3|CAA93750.1|  285|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z69884-2|CAA93749.1|  298|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z98866-2|CAB11547.1|  142|Caenorhabditis elegans Hypothetical
           protein Y49E10.2 protein.
          Length = 142

 Score =  107 bits (257), Expect = 8e-24
 Identities = 43/88 (48%), Positives = 63/88 (71%)
 Frame = +3

Query: 204 FMKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGE 383
           FMKG    P CGFS  V  ++  H V ++ ++VL+D+ LR+G+K +S WPTIPQV++ GE
Sbjct: 50  FMKGTQQEPACGFSRNVKLVLDFHNVKFQDYNVLTDQELREGVKIFSEWPTIPQVYVKGE 109

Query: 384 FVGGCDIMLQMHQSGELIEELKKVGIKS 467
           FVGGCDI++ MH+ GE+ + L + GI +
Sbjct: 110 FVGGCDILISMHKDGEISDFLDEKGISN 137


>AF125951-5|AAL27238.1|  345|Caenorhabditis elegans Hypothetical
           protein D2063.3a protein.
          Length = 345

 Score =  106 bits (254), Expect = 2e-23
 Identities = 42/88 (47%), Positives = 62/88 (70%)
 Frame = +3

Query: 204 FMKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGE 383
           FMKG P APRCGFS  +V+++  H + + S D+ SDE +RQG+K+YSNWPT PQ++ +GE
Sbjct: 151 FMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSDEAVRQGLKEYSNWPTYPQLYFDGE 210

Query: 384 FVGGCDIMLQMHQSGELIEELKKVGIKS 467
            +GG D++ +     + I++L KVG  S
Sbjct: 211 LIGGLDVVKEEFSDPQFIKQLPKVGENS 238



 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 32/84 (38%), Positives = 54/84 (64%)
 Frame = +3

Query: 204 FMKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGE 383
           FMKG  + P+CGFS  +V ++      Y + D+L DE +RQG+K +SNWPT PQ++++GE
Sbjct: 259 FMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEEVRQGLKKFSNWPTYPQLYLDGE 318

Query: 384 FVGGCDIMLQMHQSGELIEELKKV 455
            VGG D++ +       + ++ ++
Sbjct: 319 LVGGLDVVKEELLDTHFLRQIPRI 342


>AF125951-4|AAT68898.1|  342|Caenorhabditis elegans Hypothetical
           protein D2063.3b protein.
          Length = 342

 Score =  106 bits (254), Expect = 2e-23
 Identities = 42/88 (47%), Positives = 62/88 (70%)
 Frame = +3

Query: 204 FMKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGE 383
           FMKG P APRCGFS  +V+++  H + + S D+ SDE +RQG+K+YSNWPT PQ++ +GE
Sbjct: 151 FMKGDPSAPRCGFSRTIVELLNSHKIKFGSFDIFSDEAVRQGLKEYSNWPTYPQLYFDGE 210

Query: 384 FVGGCDIMLQMHQSGELIEELKKVGIKS 467
            +GG D++ +     + I++L KVG  S
Sbjct: 211 LIGGLDVVKEEFSDPQFIKQLPKVGENS 238



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 204 FMKGVPDAPRCGFSNAVVQIMRMHAVPYESHDVLSDENLR 323
           FMKG  + P+CGFS  +V ++      Y + D+L DE +R
Sbjct: 259 FMKGDRETPKCGFSRTIVDLLNKARADYHTFDILEDEEVR 298


>U40945-3|AAA81721.2|  146|Caenorhabditis elegans Hypothetical
           protein F10D7.3 protein.
          Length = 146

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/47 (42%), Positives = 31/47 (65%)
 Frame = +3

Query: 312 ENLRQGIKDYSNWPTIPQVFINGEFVGGCDIMLQMHQSGELIEELKK 452
           E +++ +K YS   T+PQ+FI+G+FVGG D    + + GEL   L+K
Sbjct: 84  EEMQEILKKYSGRTTVPQLFISGKFVGGHDETKAIEEKGELRPLLEK 130


>Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical
           protein ZC334.7 protein.
          Length = 210

 Score = 35.1 bits (77), Expect = 0.052
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 TIPQVFINGEFVGGCDIMLQMHQSGELIEEL 446
           T P VF+ G F+GG   +  MH SG+L + L
Sbjct: 172 TFPYVFVCGNFIGGSSDLFNMHHSGQLRQAL 202


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 324 QGIKDYSNWPTIPQVFINGEFVGG 395
           QG+ D +   T+PQ+FI G+FVGG
Sbjct: 74  QGLMDLTRQRTVPQIFICGKFVGG 97


>AC024756-6|AAK29881.1|  105|Caenorhabditis elegans Glutaredoxin
           protein 10 protein.
          Length = 105

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = +3

Query: 354 TIPQVFINGEFVGGCDIMLQMHQSGELIEELKKVG 458
           ++P+VFING+F GG D      ++G+L   LK+ G
Sbjct: 69  SVPRVFINGKFFGGGDDTAAGAKNGKLAALLKETG 103


>Z77662-4|CAB01193.1|  248|Caenorhabditis elegans Hypothetical
           protein F47B8.4 protein.
          Length = 248

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 249 AVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGEF 386
           + +Q +  + + Y   DV +D  +R   K  S+  T PQ+F++G F
Sbjct: 183 STIQSLNDNQIEYTIFDVSTDSEIRFISKALSDCETFPQLFVDGAF 228


>Z77662-3|CAB01194.1|  284|Caenorhabditis elegans Hypothetical
           protein F47B8.3 protein.
          Length = 284

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 249 AVVQIMRMHAVPYESHDVLSDENLRQGIKDYSNWPTIPQVFINGEF 386
           + +Q +  + + Y   DV +D  +R   K  S+  T PQ+F++G F
Sbjct: 219 STIQSLSDNQIDYTIFDVSTDSEIRFISKALSDCETFPQLFVDGAF 264


>AC006831-3|ABD63200.1|   96|Caenorhabditis elegans Hypothetical
           protein ZK121.1b protein.
          Length = 96

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 TIPQVFINGEFVGGCDIMLQMHQSGELIEEL 446
           ++PQ+F+ G F+GG   +  +  SG L E +
Sbjct: 55  SVPQIFVCGRFIGGYTELDALRNSGHLFEAI 85


>AC006831-2|AAF39994.2|  119|Caenorhabditis elegans Hypothetical
           protein ZK121.1a protein.
          Length = 119

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +3

Query: 354 TIPQVFINGEFVGGCDIMLQMHQSGELIEEL 446
           ++PQ+F+ G F+GG   +  +  SG L E +
Sbjct: 78  SVPQIFVCGRFIGGYTELDALRNSGHLFEAI 108


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 515 KYPSQVLCI*FCSFLFVLEIIVLIHFKWWYCI 610
           +Y + +  I FC+F F L +++++HF + Y +
Sbjct: 82  RYLAPIFLIDFCAFYFTLILLLVVHFIYRYVV 113


>Z69884-3|CAA93750.1|  285|Caenorhabditis elegans Hypothetical
           protein F31F6.3 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 454 TFFSSSMSSPDWCICSIM--SQPPTNSPLIK 368
           T  SSS  SP+    S++    PPTNSP+IK
Sbjct: 210 TMMSSSEISPNKSDSSVLLNKSPPTNSPIIK 240


>U50191-6|AAK31554.2|  235|Caenorhabditis elegans Hypothetical
           protein T14B4.8 protein.
          Length = 235

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 531 T*DGYFNFSSPLALPLQLLKV 469
           T DG+ +FSS +ALPL+LL +
Sbjct: 195 TADGHLSFSSDIALPLKLLLI 215


>Z69884-2|CAA93749.1|  298|Caenorhabditis elegans Hypothetical
           protein F31F6.2 protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 454 TFFSSSMSSPDWCICSIM--SQPPTNSPLIK 368
           T  SSS  SP+    S++    PPTNSP++K
Sbjct: 210 TMISSSYISPNKSGSSVLLNESPPTNSPIVK 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,404
Number of Sequences: 27780
Number of extensions: 282988
Number of successful extensions: 721
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)