Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_F_M23
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    26   0.32 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    25   0.56 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.97 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   5.2  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   5.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   6.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.8  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 701 KNKNCHTLTNSYYIRDFFINTLILTIMSL 615
           +NK+ HT TN YY+    ++ L+L I  L
Sbjct: 80  RNKSMHTATN-YYLFSLAVSDLLLLISGL 107


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 339 YSNWPTIPQVFINGEFVGGCDIMLQMHQSGELIE 440
           +S + T+ +++   E+V G D+M Q+ Q G+  E
Sbjct: 51  HSCFQTMDRLYFVMEYVNGGDLMYQIQQCGKFKE 84


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 713 TWAFKNKNCHTLTNSYYI 660
           TWA KN+NC  +T++Y I
Sbjct: 109 TWA-KNENCSGITSAYKI 125


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 57  EYICVNMNTLVRRSFQAFNTTLKISC 134
           EY C+ ++ L +R F  +   + I C
Sbjct: 227 EYSCLKVDLLFKREFSYYLIQIYIPC 252


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 57  EYICVNMNTLVRRSFQAFNTTLKISC 134
           EY C+ ++ L +R F  +   + I C
Sbjct: 227 EYSCLKVDLLFKREFSYYLIQIYIPC 252


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 314 FITQHIM-ALVRNCMHP 267
           F T +++ A  RNC+HP
Sbjct: 25  FFTMYLVRAFCRNCIHP 41


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = -3

Query: 314 FITQHIM-ALVRNCMHP 267
           F T +++ A  RNC+HP
Sbjct: 473 FFTMYLVRAFCRNCIHP 489


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,171
Number of Sequences: 438
Number of extensions: 3507
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)